Gene Aazo_5081 details

Gene Information

• Locus tag: Aazo_5081
• ID: 9342890
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: 'Nostoc azollae' 0708
• Kingdom: Bacteria
• Replicon accession: NC_014248
• Strand: +
• Start bp: 5208342
• End bp: 5209121
• Gene Length: 780 bp
• Protein Length: 259 aa
• Translation table: 11
• GC content: 42%
• Product: photosystem II S4 domain-containing protein
• Protein accession: YP_003723299
• Protein GI: 298493122

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.673535
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTACCCA GAAAAGAACT TTTAAGAGGT GTTGAAAATC GTGATAGTAT AGCTCGGGTG 
ATTGACCAGG CAGAGCAAGC TATAAAGACC TGGGAAGTGG TTTTAACTGA TTTTTTGTCT 
CCGCCAGAGT TAGCAGAAAT TCAACGGGTG TTTAGTCGAT TAACAGATGT GCATTTGGTA 
GCTTGGGGTG GATATCCTCA AGCTGAACGT CAAAGAGTGA CGATCGCACG TTCTGAATTA 
CCCTTAGATC AATCTCAAGT TGCAATCACC GCTTTAGAAA TTGTCGGTAA CTTTCTGTTT 
GATACTGCAA CTCACCGCGA TTTTTTAGGG GCGATCTTGG GGACGGGAAT TGTTCGAGAA 
AAGACTGGAG ATATTATGGT TTTGGGAGAA AGGGGAGCGC AAGTAATTGT AGTCCCGGAA 
CTAACAGAAT TTTTGGAGAT GAGTTTGAAA CAGGTGCGTT CTGTTCCAGT AAAAACTCAA 
CCCATTGATA TCAATGAGTT AAAAATCCGC GAACCGAAAA AGAAAGAATT GACGACTGTA 
GAAGCTTCTT TAAGATTAGA TGCGATCGCA TCAGCCGGTT TTGGGATGTC TCGTAGCAAA 
ATGGTTGATT TAATCGACTC CGGTGATGTG CGTGTGAATT GGAAAGAAAT CACTCAAGCT 
AGTTCCCAAC TGAAAACCGG AGATTTAATT GCCATTCCCG GTAAAGGACG TTTAGAAGTT 
GGTGAAATTA CCGTTACTAA AAAAGACCGT TACCGCATGC AATTAACTAG ATATATGTAG 

 

Protein sequence

MLPRKELLRG VENRDSIARV IDQAEQAIKT WEVVLTDFLS PPELAEIQRV FSRLTDVHLV 
AWGGYPQAER QRVTIARSEL PLDQSQVAIT ALEIVGNFLF DTATHRDFLG AILGTGIVRE 
KTGDIMVLGE RGAQVIVVPE LTEFLEMSLK QVRSVPVKTQ PIDINELKIR EPKKKELTTV 
EASLRLDAIA SAGFGMSRSK MVDLIDSGDV RVNWKEITQA SSQLKTGDLI AIPGKGRLEV 
GEITVTKKDR YRMQLTRYM