| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aazo_3875 |
|---|
| Symbol | |
|---|
| ID | 9341679 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | 'Nostoc azollae' 0708 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014248 |
|---|
| Strand | + |
|---|
| Start bp | 3928479 |
|---|
| End bp | 3930824 |
|---|
| Gene Length | 2346 bp |
|---|
| Protein Length | 781 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | |
|---|
| Product | (NiFe) hydrogenase maturation protein HypF |
|---|
| Protein accession | YP_003722507 |
|---|
| Protein GI | 298492330 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAGAG AACAAATTAG AGTGCGTGGT ACTGTGCAAG GTGTGGGTTT TCGTCCTACG
GTGTATCGTC TGGCGAAAAG TTGCGGGTTG AAGGGAGATG TTTGTAATGA TGGTGAAGGG
GTTTTAATTC GTGTTTCTGG TAGTGAGGAA GCGATAACAA AATTTGTAGA TAAGTTATAT
AAAGAATGTC CAGCTTTGGC GAAAATTAAT GAGTTGGTGA GAAGTCGGTA TTTGGGGGAG
TTTGATTTTG ATGATTTTGT AATTTCTCAC AGTATTAATA ATACTATGAA AACACAAGTT
ACTGCTGATG CGGCAACTTG TCCCCAATGT CAAAAGGAGA TTTTTGATCC TTTTAGTCGT
TATTTTCGTT ATCCCTTTAC TAATTGTACT CATTGTGGTC CCCGCTTGAG TATTATTCGC
GCTATTCCTT ACGATAGAAA TAACACCAGC ATGGTGAAGT TTCCAATGTG TCGACAGTGT
GAAAAGGAGT ATAAAGATGT GGAAAATCGG CGTTTTCATG CCCAACCTGT TGCGTGTCAC
GTTTGCGGAT CTCGTGCATG GTTAGAAAGG GCTGATGGTA AACCTGTCAT TGCTGATATG
TTTTCAATGT TGGATGATGT GGATGCTGTT TGCACTTTAT TACAAAAGGG TCAAATAGTA
GCTATTAAAG GTTTGGGTGG TATTCATTTA GCTTGTGATG CAACTCAAGA AACAGCAGTG
CAAAAATTAC GAGAACGGAA ACGCCGTTAT CATAAACCTT TTGCTTTAAT GGCGAGAGAT
ATCAATATAA TTAATGAATA TTGTTATATT AGTGATTTAG AAGAAGAATT ATTAACCAGC
CCTGCTGCAC CCATTGTTTT ATTAGAAAGA AAATCCGAAA AGCAGGTTGC TTCATCAGTC
GCACCAGGAC AATACACCCT TGGTTTCATG CTTGCTTACA CGCCTTTACA TCATTTAATT
CTCAGACGAA TGAACCGCCC CATAGTCTTA ACTAGCGGTA ATATTCCTGA TGAACCCCAG
TGTATAGCTA ATGAAGATGC TAAAGACAAA TTAGGAAAGA TAGCAGATTA TTTTCTTTTA
CATAACCGTG ATATTGTTAA CCGAGTTGAT GATTCTGTCC TCAGAGTGAT TGATGATAAA
ATACAAATAT TAAGACGGGC TAGGGGATAT GCACCTACAC CGATGATTTT ACCATCAGGA
TTTGAAAAAA CACCGCCAAT TTTAGCAATG GGTAGCGAGT TCAAAAATAC CTTTTGTTTA
TTACGTGAAG GTGAGGCTAT TCTATCTCAA CATTTGGGAG ATTTGGAAAA TGCAGCCGCC
TTTAATGCTT ATCAAGATAC TCTAAATTTA TATTTAAACT TGTTTGCCCA TAGACCAGAA
ATAATTGCTA TTGATAAACA TCCAGAATAT TTATCATCTA AACTGGGAAA GGAACTAGCT
ACAGTTAATA AAATTAAATT AAATGAAATT CAACATCATC ACGCCCATAT AGCCGCTTGC
ATGGCGGAAG AGCAAATTCC TTTAAATGCA CCACCAGTTT TAGGAATAGC GTTTGATGGC
TTAGGATATA GCGCAGATGG CACATTATGG GGCGGAGAAT TTTTACTAGC TGATTATTAT
CAATTTGCAC AAGTAGCCAC ATTTAAATCT ATGCCCATGA TAGGAGGAGA ACAAGCAATT
CATCAACCTT GGAGAAATAC TTACGCCCAA TTAATAAACG CCTTGACATG GGAGGAAATA
AAACAAAAAT ATGGTGAATT AGAAATAATC AAATTTTTAG AAAATAAAAA TCCCAAATTA
CTCAACCAGA TCATAGACAA AGGTATTAAC TCACCCTTAA CATCATCAGT AGGGAGATTA
TTTGATGCAG TAGCAGCTGC AACAGGTATT TGTCGGGAAG AATGCAGTTA TGAAGGACAA
GCAGCAATAG AAATGGAAGC GATAGCGGAT GTAAATATTC TAAACAATGA TGAAGAAACT
CTAAATTATC CCTTTAAATT TGAAAATTCC GATAAGATTT ATTGTATAAA CCCTGCACCT
ATGTGGCTGG GGATACTAAA CGACATACAG CAGAAAATTT CACCATCAGA AATAGCTGCT
AAATTTCACA TAAGTTTGGC TAGTGTAATT ACCACAATAG TTAAACAATT GTCCCAAACA
TACAAATTTA ATCAAGTTGC ATTAACAGGA GGAGTATTTC AAAACCGTAT TCTTTTAGAA
CAAGTAACCA AACGCTTACG AAAAACAGGA ATAAACGTCC TCACTCATAG CATAGTACCT
ACAAACGACG GCGGTTTATC ATTAGGACAA GCTGTTATAG CTGCTGCTAA TTACTTAAAA
AAATAG
|
|---|
| Protein sequence | MRREQIRVRG TVQGVGFRPT VYRLAKSCGL KGDVCNDGEG VLIRVSGSEE AITKFVDKLY
KECPALAKIN ELVRSRYLGE FDFDDFVISH SINNTMKTQV TADAATCPQC QKEIFDPFSR
YFRYPFTNCT HCGPRLSIIR AIPYDRNNTS MVKFPMCRQC EKEYKDVENR RFHAQPVACH
VCGSRAWLER ADGKPVIADM FSMLDDVDAV CTLLQKGQIV AIKGLGGIHL ACDATQETAV
QKLRERKRRY HKPFALMARD INIINEYCYI SDLEEELLTS PAAPIVLLER KSEKQVASSV
APGQYTLGFM LAYTPLHHLI LRRMNRPIVL TSGNIPDEPQ CIANEDAKDK LGKIADYFLL
HNRDIVNRVD DSVLRVIDDK IQILRRARGY APTPMILPSG FEKTPPILAM GSEFKNTFCL
LREGEAILSQ HLGDLENAAA FNAYQDTLNL YLNLFAHRPE IIAIDKHPEY LSSKLGKELA
TVNKIKLNEI QHHHAHIAAC MAEEQIPLNA PPVLGIAFDG LGYSADGTLW GGEFLLADYY
QFAQVATFKS MPMIGGEQAI HQPWRNTYAQ LINALTWEEI KQKYGELEII KFLENKNPKL
LNQIIDKGIN SPLTSSVGRL FDAVAAATGI CREECSYEGQ AAIEMEAIAD VNILNNDEET
LNYPFKFENS DKIYCINPAP MWLGILNDIQ QKISPSEIAA KFHISLASVI TTIVKQLSQT
YKFNQVALTG GVFQNRILLE QVTKRLRKTG INVLTHSIVP TNDGGLSLGQ AVIAAANYLK
K
|
|---|
| |