Gene Aazo_1897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAazo_1897 
Symbol 
ID9339690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism name'Nostoc azollae' 0708 
KingdomBacteria 
Replicon accessionNC_014248 
Strand
Start bp1968940 
End bp1969737 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content41% 
IMG OID 
ProductFliA/WhiG subfamily RNA polymerase sigma 28 subunit 
Protein accessionYP_003721112 
Protein GI298490935 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTTAATC CCCAATGTGC CATGCCTACT ACAGCCACGA ACGAACTCAA ACATGAGATT 
TCCCAATTAT TGCGAGAGTA TCAGCAATGT CCCTCAGAAC GTCTCCGCAA TCAATTAGTG
AAAGTAAATT TTGGACTAGT GAGAAAAGAA GCTCATTACT GGATTAATCA ATGCCAAGAA
AGCTACGATG ATTTGATCCA GGTCGGCTGT TTGGGCTTGA TTAGAGCTAT TGAAAAATTT
GAACTTTCTA AAGGAAATGC TTTTAGTTCT TACGCCATTC CTTATATTCG TGGAGAAATT
CAACATTACC TCCGAGATAA AGGCGTGACT ATGCGAATCC CCAGACGATG GTTGGCACTG
CAACAACAAG CAATAGGACT GTCCCGTTCT TTACGCGAAA AATATAACCG CCAACCTACT
GATGCGGAAT TAGCAGCAGT ATTGGCAATT TCCCTGAGTG AATGGGAGGA AATTAAATTA
GCATGGATGA ATCGCTCCCC CTTGAGTCTT GATGTACCCA TAAAAGATGG AGAAGAAGGT
GCTTCCTGTT TGGGTGAACT AGTTCCAGAT CCTCATTACC GCAGTTTTCA ACTGGCTCAA
GAAGACCAAA TTCGTCTACA ACAAGCATTG GTACAGCTGG AAAATCGTAC CCGCGAAGTT
TTAGAGTGTG TATTTTTGCA AGATTTGACA CAGAAGCAAG TTGCAGAACA TTTGGGCATT
AGTGTAGTTA CTGTGTCTCG TAGAGTCAAA AAAGGACTGG ATTTGTTGAA ATATCTTATG
GGTGTAGCAG AAGATTAA
 
Protein sequence
MLNPQCAMPT TATNELKHEI SQLLREYQQC PSERLRNQLV KVNFGLVRKE AHYWINQCQE 
SYDDLIQVGC LGLIRAIEKF ELSKGNAFSS YAIPYIRGEI QHYLRDKGVT MRIPRRWLAL
QQQAIGLSRS LREKYNRQPT DAELAAVLAI SLSEWEEIKL AWMNRSPLSL DVPIKDGEEG
ASCLGELVPD PHYRSFQLAQ EDQIRLQQAL VQLENRTREV LECVFLQDLT QKQVAEHLGI
SVVTVSRRVK KGLDLLKYLM GVAED