| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aazo_1015 |
|---|
| Symbol | |
|---|
| ID | 9338810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | 'Nostoc azollae' 0708 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014248 |
|---|
| Strand | - |
|---|
| Start bp | 1081520 |
|---|
| End bp | 1083397 |
|---|
| Gene Length | 1878 bp |
|---|
| Protein Length | 625 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | DNA-directed RNA polymerase subuint gamma |
|---|
| Protein accession | YP_003720505 |
|---|
| Protein GI | 298490328 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGATCCG CCCAATCTAA TCAATTTGAC TACGTAAAAA TTGGACTAGC ATCACCAGAA
CGTATCCGCC AGTGGGGTGA GCGAACTTTA CCTAATGGTC AGGTGGTGGG TGAGGTGACA
AAGCCAGAAA CTATCAACTA CCGGACTCTG AAACCGGAGA TGGATGGTTT ATTTTGTGAG
CGCATTTTTG GACCGGCTAA GGACTGGGAA TGCCATTGCG GTAAGTATAA ACGGGTACGT
CACAGAGGTA TTGTTTGTGA ACGCTGTGGT GTGGAGGTCA CAGAATCACG GGTGCGCCGC
CACAGAATGG GTTTTATTAA GCTGGCGGCT CCGGTAGCTC ATGTTTGGTA TCTCAAGGGT
ATCCCCAGTT ATATTGCTAT TTTGTTGGAT ATGCCCTTGC GGGATGTGGA GCAAATTGTT
TATTTCAACT CCTATTGTGT GTTGGCTCCT GGTAATGCTG ATACTCTCGC TTACAAACAA
CTGTTGAGTG AAGACCAGTG GTTAGAAATT GAAGATGCCA TCTATAGCGA AGATTCCCAA
CTAGTGGGGG TAGAAGTAGG TATTGGGGCA GAAGCACTGC TGCGGCTGTT GGCAGATATT
AATTTGGAAG AAGAAGCAGA AAAACTCAGA GAGGAAATTG AAAACGCCAA GGGACAAAAA
CGGGCGAAGT TGATTAAACG CCTACGGGTG ATTGATAACT TTATTGCCAC TGGTTCTAAG
CCAGAGTGGA TGGTGATGGC AGTGATTCCG GTGATTCCTC CCGATTTGCG CCCGATGGTG
CAGTTGGATG GTGGTAGATT TGCGACTAGT GATTTAAATG ATTTATACCG CCGGGTAATT
AACCGCAATA ACCGTCTAGC CAGACTGCAA GAAATCCTTG CGCCAGAAAT CATTGTCCGT
AATGAAAAAC GGATGTTGCA AGAAGCAGTA GATGCGCTGA TTGACAACGG TCGTCGGGGT
AGGACTGTGG TGGGAGCAAA TAACCGCCCC TTGAAGTCGC TGTCAGACAT TATTGAGGGT
AAACAAGGTC GTTTCCGGCA AAACCTTTTG GGTAAACGGG TGGACTATTC TGGACGTTCG
GTAATTGTGG TGGGTCCCAA GCTGCAAATT CACCAGTGCG GACTGCCTAG AGAAATGGCT
ATTGAGTTGT TTCAGCCCTT TGTAATTAAC CGCCTGATTC TTTCGGGGAT GGTGAATAAT
ATCAAGGCAG CCAAAAAGCT GATTTCTCGC AATGACCCCA GTGTGTGGGA TGTCTTGGAA
GAGGTGATTG AGGGACATCC GGTGATGTTA AACCGTGCGC CCACTCTGCA CCGTTTGGGG
ATTCAGGCTT TTGAACCGAT TTTGGTAGAA GGGAGAGCGA TTCAACTCCA TCCCCTAGTA
TGTCCCGCTT TTAACGCTGA CTTTGACGGC GACCAAATGG CGGTTCACGT ACCTTTATCA
TTGGAAAGTC AGGCAGAGGC GAGATTGTTA ATGTTAGCTT CTAACAATAT TCTTTCACCT
GCGACGGGCA AACCTATTGT CACCCCTAGC CAAGATATGG TGTTAGGGGC TTATTACCTG
ACGGCAGAAA ACCCTGGTGC TACCAAAGGG GCTGGGGGTT ACTTTACTTC TCTAGATGAC
GTGATTATGG CATATCAGCA AGAACAGGTT GACCTGCATT CTTATGTTTA TGTGCGGTTT
GATGGAGAGA TGGAAACCAG TCAACCAGAT ACTGAGCCAG TGGAAGTAAT AGAAAATGAG
GATGGCACCC AGACTTTAAT GTATAAGTTC CGCCGTGTCC GTCAAGATGC CGAAGGTAAT
TTAATTTCTC AGTATATCTA CACTACCCCT GGTCGGGTAA TTTATAACAA AGCAATTCAA
GAAGCTTTAG CAAGTTAG
|
|---|
| Protein sequence | MRSAQSNQFD YVKIGLASPE RIRQWGERTL PNGQVVGEVT KPETINYRTL KPEMDGLFCE
RIFGPAKDWE CHCGKYKRVR HRGIVCERCG VEVTESRVRR HRMGFIKLAA PVAHVWYLKG
IPSYIAILLD MPLRDVEQIV YFNSYCVLAP GNADTLAYKQ LLSEDQWLEI EDAIYSEDSQ
LVGVEVGIGA EALLRLLADI NLEEEAEKLR EEIENAKGQK RAKLIKRLRV IDNFIATGSK
PEWMVMAVIP VIPPDLRPMV QLDGGRFATS DLNDLYRRVI NRNNRLARLQ EILAPEIIVR
NEKRMLQEAV DALIDNGRRG RTVVGANNRP LKSLSDIIEG KQGRFRQNLL GKRVDYSGRS
VIVVGPKLQI HQCGLPREMA IELFQPFVIN RLILSGMVNN IKAAKKLISR NDPSVWDVLE
EVIEGHPVML NRAPTLHRLG IQAFEPILVE GRAIQLHPLV CPAFNADFDG DQMAVHVPLS
LESQAEARLL MLASNNILSP ATGKPIVTPS QDMVLGAYYL TAENPGATKG AGGYFTSLDD
VIMAYQQEQV DLHSYVYVRF DGEMETSQPD TEPVEVIENE DGTQTLMYKF RRVRQDAEGN
LISQYIYTTP GRVIYNKAIQ EALAS
|
|---|
| |