| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aazo_0840 |
|---|
| Symbol | |
|---|
| ID | 9338628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | 'Nostoc azollae' 0708 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014248 |
|---|
| Strand | + |
|---|
| Start bp | 891246 |
|---|
| End bp | 892889 |
|---|
| Gene Length | 1644 bp |
|---|
| Protein Length | 547 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | |
|---|
| Product | thiamine pyrophosphate protein domain-containing protein TPP-binding protein |
|---|
| Protein accession | YP_003720383 |
|---|
| Protein GI | 298490206 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.923558 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATACGG CAGATTTGTT AGTACAGTGT TTAGAAAATG AAGGAGTGCA ATATGTTTTT
GGACTGCCAG GTGAGGAAAA TTTGCACGTT TTAGAAGCTT TAAAAAACTC ATCCATTCAA
TTTATTACTA CTCGTCACGA ACAGGGTGCA GCTTTCATGG CGGATGTTTA TGGGAGGTTA
ACTGGTAAAG CCGGAGTCTG TCTTTCCACT CTTGGTCCTG GTGCTACTAA TTTAATGACT
GGGGTTGCAG ATGCTAACCT TGATGGTGCA CCATTAGTAG CAATTACCGG ACAGGTGGGA
ACAGATAGAA TGCATATTGA ATCCCATCAA TATTTAGATT TAGTGGCTAT GTTTGCGCCA
GTTACTAAGT GGAATAAGCA GATAGTTAGA CCGAGTATTA CACCAGAAGT TGTGAGAAAA
GCATTCAAGC GCTCGCAAAC TGAAAAACCT GGTGCAGTCC ACATAGATTT ACCCGAAAAT
ATTGCTGCTA TGCCCGTAGA AGGCAAACCT TTACATAAGG ATAACAGCGA AAAAACCTAT
GCTGCTTTTG CTAGTATTCG CGCTGCTGCT GCCATAATTT CTCAAGCAGT TAATCCCATT
ATCTTAGTGG GAAATGGGGC GATTCGCGCT CAAGCTAGTG ATGCGGTGAC GCAATTCACC
ACCCAAATAA ATATTCCAGT CGTTAATACT TTCATGGGTA AAGGCGTAAT TCCCTACACT
CATCCTTTAG CACTTTATTC TGTAGGATTA CAACAAAGAG ATTTCATTAC TTGTGGTTTT
GATAATACCG ATTTAGTAAT TGCAATTGGC TATGATTTAA TTGAATTTTC TCCCAAAGAA
TGGAATCCTG ACGGCAAAAT TCCTATTATC CATATTGCTG CTATTTCAGC AGAAATTGAT
AGTAGTTACA TTCCTAAAGT CGAAGTTATT GGGGATATTT CTGATTCAGT TAATGAAATA
TTAAAATTAG CAGACAGACA AGGAAAACCC AATCCCTATG CCATCAGTTT ACGTTCTAAT
ATTCGCGCTG ATTACGAACA ATATGCCCAT GATGATGGCT TCCCAATAAA ACCGCAAAGA
TTAATTTATG ATTTGCGGCA AGTGATGGGA CCAGATGATA TTGTCATTTC TGATGTAGGT
GCACATAAAA TGTGGATTGC TAGACATTAT CATTGTCATA GTCCTAATAC GTGCATTATT
TCCAATGGAT TTGCAGCAAT GGGAATTGCC ATTCCTGGGG CTTTAGCTGC TAAACTTGTC
TATCCAGATC GTAAAGTTGT AGCAGCTACA GGCGATGGTG GCTTTATGAT GAACTGTCAA
GAATTAGAAA CAGCTTTGCG TGTTGGTACA CCTTTTGTTA CCTTAATTTT CAATGACGGT
GGCTATGGTT TAATTGAATG GAAACAAGAA AATCAATTTG GTAAAGGTAA TTCATGTTTT
GTGCATTTTG GTAATCCTAA TTTTGTCAAA TTAGCCGAAA GTATAGGATT AAAAGGTTAC
AGGGTTGAAT CAGCAACTGA TTTAATTCCT GTCGTCAAAG AAGCCCTAAT TCAAGATGTT
CCTGCGGTAA TAGATTGTCC TGTAGATTAT CGAGAAAACC GCCGTTTTAG TCAAAAAGCT
GGGGAGTTAA ATTGTGATAT TTAA
|
|---|
| Protein sequence | MNTADLLVQC LENEGVQYVF GLPGEENLHV LEALKNSSIQ FITTRHEQGA AFMADVYGRL
TGKAGVCLST LGPGATNLMT GVADANLDGA PLVAITGQVG TDRMHIESHQ YLDLVAMFAP
VTKWNKQIVR PSITPEVVRK AFKRSQTEKP GAVHIDLPEN IAAMPVEGKP LHKDNSEKTY
AAFASIRAAA AIISQAVNPI ILVGNGAIRA QASDAVTQFT TQINIPVVNT FMGKGVIPYT
HPLALYSVGL QQRDFITCGF DNTDLVIAIG YDLIEFSPKE WNPDGKIPII HIAAISAEID
SSYIPKVEVI GDISDSVNEI LKLADRQGKP NPYAISLRSN IRADYEQYAH DDGFPIKPQR
LIYDLRQVMG PDDIVISDVG AHKMWIARHY HCHSPNTCII SNGFAAMGIA IPGALAAKLV
YPDRKVVAAT GDGGFMMNCQ ELETALRVGT PFVTLIFNDG GYGLIEWKQE NQFGKGNSCF
VHFGNPNFVK LAESIGLKGY RVESATDLIP VVKEALIQDV PAVIDCPVDY RENRRFSQKA
GELNCDI
|
|---|
| |