| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4770 |
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| Symbol | |
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| ID | 4667220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 5322752 |
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| End bp | 5323951 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639825962 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_973075 |
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| Protein GI | 120613397 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.432764 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGATC CGGCCATGAC CTCCTCCCAC CGCCGCCCTC TGGGCCTGCT CGCCCTCTGC
CAGGGGCTGT TCCTCACCAA CAACGTCGTC TTCATCGCCA TCAACGGGCT GGTGGGCCTG
CAGCTCGCGC CACGCGGCTG GATGGCCACC CTGCCGGTGA TGGGCTACGT GGTGGGCGGA
GCACTGTCCA CCGGCCCCGT GGCCCGGGCC CAGAGGCGCT GGGGGCGGCA GGCCTCCTTC
CAGATCGGGC TGGCCGTGGC GGCGGCGTCC GCCTTGCTCT GCGCGCTGGC CGTGTGGATG
CACGCGTTCT GGCTGCTGTG CGCTGCCACG CTGATGGCGG GCTACTACAG TGCCAACGGC
CAGCTCTACC GCTTCGCCGC GGCCGAGATC GCGCCCGCGC CGCAGCGGGA CACGGCCATG
TCGCTGGTGA TGGCCGGCGG CCTGCTGGGC GCGGTGGCCG GCCCCAACCT GGCCAACCAC
ACGCGCGACC TGGTCTCGGT GCCATTCACC GGGGCCTACC TGGCACTGTT CGTGGTGGCC
CTGGTGTCCA TGGCCTGCAT GGCGGGCATC CGCTTTCCGG CCGCTCCACC GGCGTCGGCG
GCCGGCGCTG CCACGGGCCG TTCGGTGGCG CAGCTGCTGC GCGATCCGGT GTTCGCGGTC
GCGATGCTGG GGGCGGCGCT GGGCTACGGA GTGATGAACC TGCTGATGGC GGCCACGCCG
CTGGCCATGC AGGTGTGCGG GCACGCCTTC GGCGACGCGG CCTTCGTGCT CGAATGGCAC
GTGATCGGCA TGTTCGCCCC GGGCTTTTTC ACGGGCCACC TGATCCGGCG ATTCGGCGTG
CTGCGCATCA TGGCGGCCGG CGTGGCGCTC AATGCCGCCT GCGTGGCGAT CGCGCTCTCC
GGCGTGGAAC TGGCGCATTT CGTGGCCGCG CTCTTCCTGC TGGGCGTGGG CTGGAACTTC
CTCTTCACGG GCAGTACCGC GCTGGCGATG CGCGCCTACC GGCCCGAGGA GAAGGACCGC
GCCCAGGCCG CGATCAATTT CGGGGTCTTC GCCACCATGG CGCTGACATC CTTCGCGTCG
GGGGCGCTGG TCACCACCCA GGGCTGGACG CTGCTGAACT ACGGCTCCCT GCTGCCCATC
GGGCTCACCG GCGCGGGGCT CGCGTGGCTG GCACTGCGGC AACAGCAGCG TCAACCGTGA
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| Protein sequence | MQDPAMTSSH RRPLGLLALC QGLFLTNNVV FIAINGLVGL QLAPRGWMAT LPVMGYVVGG
ALSTGPVARA QRRWGRQASF QIGLAVAAAS ALLCALAVWM HAFWLLCAAT LMAGYYSANG
QLYRFAAAEI APAPQRDTAM SLVMAGGLLG AVAGPNLANH TRDLVSVPFT GAYLALFVVA
LVSMACMAGI RFPAAPPASA AGAATGRSVA QLLRDPVFAV AMLGAALGYG VMNLLMAATP
LAMQVCGHAF GDAAFVLEWH VIGMFAPGFF TGHLIRRFGV LRIMAAGVAL NAACVAIALS
GVELAHFVAA LFLLGVGWNF LFTGSTALAM RAYRPEEKDR AQAAINFGVF ATMALTSFAS
GALVTTQGWT LLNYGSLLPI GLTGAGLAWL ALRQQQRQP
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