Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4749 |
Symbol | |
ID | 4665405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 5296987 |
End bp | 5297808 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639825942 |
Product | GntR family transcriptional regulator |
Protein accession | YP_973055 |
Protein GI | 120613377 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACGA AACCGCCAGC CGGCAAGCCG ATCAAGCCCC TGAAGCCCCT CAAGCTCCCC GACCTGGTGG CGCAGGAGAT CAAGCGGCTC ATCACCGAGA AGAACCTGAG TCCCGGCGAC CGCCTGCCGC GCGAGAGCGA ACTGCAGGCG CAGTTCGAGG TGAGCAAGGG CACCATCCGC GAGGCGCTCA AGTCGCTGGA AGTGCAGGGC CTGGTGACCA TCTCCACCGG CCCCTCGGGC GGCGGCACCA TCGCCGAGGT GTCGCTGGAC CGCACGCTGC AGTTCCTGCA GAACTATCTG TTCTTCCAGG ACGTCACCAT CGACAACATC TACGCCGTGC GCCAGTTCCT GGAGCCCGAA CTGGCTGCCG GCGCCGTGCC GCACCTGACG GAGGCCGACT TCGAGGCGCT GGAGCACAGC ATCGCCTGCT GCGATCCCCA CTCCAGCAGC GAAGACCTGA TCGCCCAGCG CCGGGAGGAC GTGAACTTCC ACGACATCCT GGCTGCGGCC AATCCGAACC CGTTCCTGCG CTTCGCCTGC GAGCTGATCA ACGAGATGCT GCGCCAGCTC ATCGTCTATG GCAACCGCAC CCCGAAATCC GAGCATCGCC GCTTCGGAGA GACCAACGCC CGGTTCCACC GCGAGATCGT GCAGGCGGCG CGGGCGCGCG ATGCTGCCCT GGTGCGCGAG CTGATGGCGC GGCACATGCT CGACGCCGCC AGCAGCGTCC AGCGCATGAA GGGGCGCATC CAGGGCCGCC TGATCCTGGA TGCCGAGACG CTGCGCGGAC CCCGGTCGGT CCACCTGCGC AAGAAGGAAT GA
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Protein sequence | MATKPPAGKP IKPLKPLKLP DLVAQEIKRL ITEKNLSPGD RLPRESELQA QFEVSKGTIR EALKSLEVQG LVTISTGPSG GGTIAEVSLD RTLQFLQNYL FFQDVTIDNI YAVRQFLEPE LAAGAVPHLT EADFEALEHS IACCDPHSSS EDLIAQRRED VNFHDILAAA NPNPFLRFAC ELINEMLRQL IVYGNRTPKS EHRRFGETNA RFHREIVQAA RARDAALVRE LMARHMLDAA SSVQRMKGRI QGRLILDAET LRGPRSVHLR KKE
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