Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4661 |
Symbol | |
ID | 4669887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 5199961 |
End bp | 5200722 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639825857 |
Product | TetR family transcriptional regulator |
Protein accession | YP_972970 |
Protein GI | 120613292 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.384248 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCAC GACGCCCACG TTCCGCCGAG GCTCCCCCTC CGGCATCGTC TCCAGCCCCG ACGGGAGAGG AGCAGGCATC CCCGCGGGCG CGCCTGCTGT CCGCCGCCCT GCGTCTGTTT TCCGAGCAGG GCTACACCAA GACCTCGGTC CGGGCCATTG CCGCGGCGGC GCAGGCCAAC GTGGCGGCCG TGAGCTACTA CTTCGGCGAC AAGGCATCGC TCTACAGTGC CGTTTTCACC GAGCCCACGT GGGACCACGC ATCGCTGCGC TGCGCCTTCG CCCAGCCCGG CATCACGATG GAAGAGGCGC TGCGGCGCTA CTTCCACGCG GCGCTCGCCC CCCTTGCCCA TGGCGAACTG GCCCGCCAGA GCGTGCGGCT GCACATCCGC GAAATGCTCG AACCGACGGG GCAGTGGGAA CGCGCGCTCG ACCAGGACGT GCGCCAGCCC CATGACGCGC TCGTGCGACT GCTCTGCCGC CACATGGGGG TCGCCACCGC CGACCTCGCC GTCCACCGGC TGGCGCTGAC CCTCTCCAGC ATGGCGTTCC AGCTCTGGGG CCATCGCGAC GACATCGAGG CCCTCAAGCC CGAACTGCTG GCCACGGCCG AGGCCGTGGA ACTCTGGGCC GACCGCATGG TGGACTATGC GCTGGCCATG ATCGCGGCCG AAAAAGCCTG GCGGCAAGCC ACTGCGGCCC CTGCGGCCCG GGCCCCTGCC GCTTCCCGTT CACCGGCCCG CCGGAAGACG CCGAAACCAT GA
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Protein sequence | MPARRPRSAE APPPASSPAP TGEEQASPRA RLLSAALRLF SEQGYTKTSV RAIAAAAQAN VAAVSYYFGD KASLYSAVFT EPTWDHASLR CAFAQPGITM EEALRRYFHA ALAPLAHGEL ARQSVRLHIR EMLEPTGQWE RALDQDVRQP HDALVRLLCR HMGVATADLA VHRLALTLSS MAFQLWGHRD DIEALKPELL ATAEAVELWA DRMVDYALAM IAAEKAWRQA TAAPAARAPA ASRSPARRKT PKP
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