| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4585 |
|---|
| Symbol | |
|---|
| ID | 4666576 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 5103342 |
|---|
| End bp | 5105429 |
|---|
| Gene Length | 2088 bp |
|---|
| Protein Length | 695 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639825783 |
|---|
| Product | transketolase |
|---|
| Protein accession | YP_972896 |
|---|
| Protein GI | 120613218 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0021] Transketolase |
|---|
| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAATT CTCAACAGAT GGCGAATGCG ATCCGCGCAC TCGCAATGGA TGCAGTTCAA
CAGGCCAATT CCGGCCATCC CGGTGCCCCG ATGGGCATGG CCGACATGGC CGTCGCGCTG
TGGTCCCGCC ACCTCCGCCA CAACCCCGCC AATCCGCAGT GGGCCGACCG CGACCGCTTC
GTGCTCTCCA ACGGCCACGG CTCCATGCTG CTGTACGCGC TGCTGCACCT CACGGGCTAC
GACCTGCCCA TCGAGGAGCT GAAGAACTTC CGCCAGCTGC ACAGCAAGAC GGCCGGCCAC
CCCGAATACG GCATCACCCC CGGCGTCGAG ACGACCACCG GCCCGCTGGG CCAGGGCATC
ACCAACGCCG TGGGCTTCGC GCTGGCCGAG AAGCTGCTGG CCCGCGAGTT CAACCGCAGG
AACGGCGACG TGGACCACAC CATCGTGGAC CACCACACCT ACGTGTTCCT CGGCGACGGC
TGCCTGATGG AGGGCATCAG CCAGGAGGCG ATCTCGCTGG CCGGCGCCTG GAAGCTGGGC
AAGCTGATCG CGCTCTACGA CGACAACGGC ATCTCCATCG ACGGCCAGGT CGCGCCCTGG
TTCGTGGACG ACACGCCGGG CCGCTTCCGC GCCAGCGGCT GGAACGTGAT CGGACCGGTC
GATGGCCACG ACGTGGAGGC CGTGGCCGCC GCGGTGCAGA GCGCCAAGAC CAGCATCGAC
AAGCCCACCC TGATCGTCTG CAAGACCGCC ATCGGCAAGG GTTCGCCCAA CCGCGCCGGC
ACCTCCAAGG CCCACGGCGA GCCGCTGGGC GCCGACGAGA TCACCCTGAC GCGCAACGCC
ATCGGCTGGA GCCACGTGCC CTTCGAGATC CCGGCCGAGG TCTATGCGGA CTGGAACGCC
AAGGACGCCG GCGCGCAGGC CGAGGCCGAC TGGCAGCAGC GCTTCGACGC CTACGCCGCC
GCGTATCCCG AACTGGCCGC CGAATTCCTG CGCCGCATGG CGGGCGACCT GCCCAGGCAC
TTCGCCCAGA CCGCCGTGGA CACCGTGGTG AACGCCCACA CCAAGGCCGA GACCGTGGCC
AGCCGCAAGG CCAGCCAGCT CGCGCTGGAA GCCTTCACGG CCGCGCTGCC CGAACTGCTC
GGCGGCAGCG CCGACCTGAC GGGCTCCAAC CTCACCAACA CCAAGAGCAC GCCCGCGCTG
CGCTTCGACG AGCAGGGCGA CGTGGTGCAG GTGGAAGTCA ACACCGGCGG CGCGGAAACC
GCCAAGCTGG GCGGCCGCCA CATCAACTAC GGCGTGCGCG AGTTCGGCAT GGCCGCGATC
ATGAACGGCA TCGCGCTGCA CGGCGGCTTC ATCCCCTACG GCGGCACCTT CCTCACGTTC
AGCGACTACA GCCGCAACGC CATCCGCATG GCCGCGCTCA TGAAGCTGCG CGTGGTGCAC
GTGTTCACGC ACGACTCCAT CGGCCTGGGC GAAGACGGCC CCACCCACCA GTCGATCGAG
CATGCCGCCA GCCTGCGACT GATCCCGGGC CTGGACGTCT GGCGCCCCGC CGACACGGCC
GAGACCGCCG TGGCCTGGAG CGTGGCCCTG TCCAACCGCA ACCGGCCCAC CGCCCTGCTG
CTGTCGCGCC AGAACCTGGC CTACGCGGCC AAGCGCGACC TGGGCGACAT CTCGCGCGGC
GCCTACGTGC TCTCCGAGCC GGCCGACGCG GGCATCAAGA AAAAGGCCCA GGCCGTGATC
ATCGCCACGG GCTCCGAAGT CCAGCTGGCC CTGGCCGCGC AGAAGCTGCT GGCCGAGAAG
AAGATCGCCG TGCGCGTGGT CTCCATGCCC AGCACCACCA CCTTCGACCG CGAGGATGCG
AAGTACAAGG CCAGCGTGCT GCCGGCCGGC GTGCCGCGCA TCGCCGTGGA GATGGGCGTG
ACCGACTTCT GGTGGAAGTA CGGCTGCGCC GCCGTGGTCG GCATCGATAC CTTCGGCGAA
TCGGCCCCGG CCCCGGTGCT GTTCAAGCAC TTCGGCTTCA CGCCGGAGAA CGTGGCCGAC
TCCGTGATGG TGGCGATCGG CGCCGCGCGG CTGAAGAAGG CCCGCTGA
|
|---|
| Protein sequence | MANSQQMANA IRALAMDAVQ QANSGHPGAP MGMADMAVAL WSRHLRHNPA NPQWADRDRF
VLSNGHGSML LYALLHLTGY DLPIEELKNF RQLHSKTAGH PEYGITPGVE TTTGPLGQGI
TNAVGFALAE KLLAREFNRR NGDVDHTIVD HHTYVFLGDG CLMEGISQEA ISLAGAWKLG
KLIALYDDNG ISIDGQVAPW FVDDTPGRFR ASGWNVIGPV DGHDVEAVAA AVQSAKTSID
KPTLIVCKTA IGKGSPNRAG TSKAHGEPLG ADEITLTRNA IGWSHVPFEI PAEVYADWNA
KDAGAQAEAD WQQRFDAYAA AYPELAAEFL RRMAGDLPRH FAQTAVDTVV NAHTKAETVA
SRKASQLALE AFTAALPELL GGSADLTGSN LTNTKSTPAL RFDEQGDVVQ VEVNTGGAET
AKLGGRHINY GVREFGMAAI MNGIALHGGF IPYGGTFLTF SDYSRNAIRM AALMKLRVVH
VFTHDSIGLG EDGPTHQSIE HAASLRLIPG LDVWRPADTA ETAVAWSVAL SNRNRPTALL
LSRQNLAYAA KRDLGDISRG AYVLSEPADA GIKKKAQAVI IATGSEVQLA LAAQKLLAEK
KIAVRVVSMP STTTFDREDA KYKASVLPAG VPRIAVEMGV TDFWWKYGCA AVVGIDTFGE
SAPAPVLFKH FGFTPENVAD SVMVAIGAAR LKKAR
|
|---|
| |