Gene Aave_4562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4562 
Symbol 
ID4668013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp5079438 
End bp5079935 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content69% 
IMG OID639825760 
Productphosphoribosylaminoimidazole carboxylase, catalytic subunit 
Protein accessionYP_972873 
Protein GI120613195 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.777583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCCA TCCAGATCGG CGTGGTCATG GGCTCCAGCA GCGACTGGGA GACCATGCAG 
CACGCAGTGC AGATTCTCCA GCAATTCGAC ATCGCCCACG AAGCACGCGT GGTCTCGGCG
CACCGCATGC CCGACGACAT GTTCGCCTAT GCCGAGTCGG CGGCGCAGCG TGGCCTGAAG
GCGATCATCG CCGGCGCGGG GGGCGCGGCC CACCTGCCGG GCATGATCGC GGCCAAGACC
ACGGTGCCCG TTCTGGGCGT GCCGGTGGCC AGCCGGCATC TGCAGGGCGT CGATTCGCTG
CACAGCATCG TGCAGATGCC CAAGGGCATT CCCGTGGCCA CGTTCGCGAT CGGCACGGCC
GGCGCGGCCA ATGCGGCCCT TTTCGCCGTC GCCCTGCTGG CTAACGAGAA CCCGGCCCTG
CGCGAGCGGC TGGAGGCATT CCGCCAGGAG CAGACCGCGG CGGCTCGCGG GATGGCGCTT
CCGACCGAAG CGGCATGA
 
Protein sequence
MKPIQIGVVM GSSSDWETMQ HAVQILQQFD IAHEARVVSA HRMPDDMFAY AESAAQRGLK 
AIIAGAGGAA HLPGMIAAKT TVPVLGVPVA SRHLQGVDSL HSIVQMPKGI PVATFAIGTA
GAANAALFAV ALLANENPAL RERLEAFRQE QTAAARGMAL PTEAA