| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4499 |
|---|
| Symbol | |
|---|
| ID | 4668686 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 4998276 |
|---|
| End bp | 4999007 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639825687 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_972810 |
|---|
| Protein GI | 120613132 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.144103 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCA CCGCCGACCT CGTCGCTGCC CTCAAGAAGG AACTCAAGGC CGCGCACATG
ACGTATGCCG ACCTCGCCCA GGCCCTCGGC ATGGCCGAAT CCAGCGTCAA GCGCATGCTG
GCGCGCGGCG ACATGCCGCT GTCGCGCATC GACGCCATCT GCCGCGCGCT GCGGCTGGAT
TTCGCCGACC TCGCGCGCCG CGTGGCCGAC AGCCAGCCCC TGCTCGACCA GCTCTCGCTG
GAACAGGAGC GCGCGGTGGT GGCCGACAAG AAGCTGCTGC TCATGGCCAT CTGCGTGCTG
AGCCAGTGGA CGCTGGAGCA GATCCTCGGC ACCTACCGGC TCTCGGACGC CGAAGGCGTC
AAATACCTCG CGCAGCTCGA CCGCATCGGC ATCATCGAGC TGCGCCCGCT CAACCGCTAC
CGGCTCAAGC TCGCCAAGAC CTTCCGCTGG CGCGCACATG GTCCGGTGAT GCACTACTTC
CGCGACCATG CCCTGCTCGA TTACTTCTCG GGCGGCTTCG ACGGCCCGGG CGAAGGCGTG
CTGATGGTGC ACGGCGCCAT CGGCCGCAGC CTCGCGCCCG CCTTCCAGGA GCGCCTGCAG
CGCGTGGCGC ACGACTTCGC GCAGCAGCAC CTCGCCGACC AGCGGCTGCC CGAGCGCGAC
CGCGAGGGCT ACACCGTGCT GCTGGCGATG CGGCGCTGGG AGTTCGAGGC CTTCACCGCG
ATGCGGCGCT GA
|
|---|
| Protein sequence | MSTTADLVAA LKKELKAAHM TYADLAQALG MAESSVKRML ARGDMPLSRI DAICRALRLD
FADLARRVAD SQPLLDQLSL EQERAVVADK KLLLMAICVL SQWTLEQILG TYRLSDAEGV
KYLAQLDRIG IIELRPLNRY RLKLAKTFRW RAHGPVMHYF RDHALLDYFS GGFDGPGEGV
LMVHGAIGRS LAPAFQERLQ RVAHDFAQQH LADQRLPERD REGYTVLLAM RRWEFEAFTA
MRR
|
|---|
| |