| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4471 |
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| Symbol | |
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| ID | 4667991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 4967646 |
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| End bp | 4969937 |
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| Gene Length | 2292 bp |
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| Protein Length | 763 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639825661 |
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| Product | primosomal protein N' |
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| Protein accession | YP_972784 |
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| Protein GI | 120613106 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00895191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.043274 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCGGG ATGCCCACAA AGTTATCCAC ACCCCGGCCC GAAAACCTTC CGTGCACCCG
GCGGCCGCTT GCGGCAGACT CGGGCGCCGC CCTGCACTTG CCTCCGTCCC TTCCGTGTCC
CAACCCCTGT CCCGCGTCCC GTCCGATGCA TCGCCACCCG CCGCAACCGA CGGCGGCGCG
ATCGTCTCGG TCGCCGTCCA GACGCCCGCG CACAGCGCGG TGGGCGGCCC GCTGAGCTAC
GCGAGCGCGC ATCCGCTGGA GCCGGGCACG CTGGTGCGGG TGCCCCTGGG CACGCGCGAA
GTGCTGGGCG TGGTGTGGGA TGCGCCGGCC GATGCGCCGG AGCTGCCGCG CGGCGCCGCG
GTGCGGCCGG TGGCGGGCGT GCTGGAGGGG CTGGCGCCGC TGGACGCCGC CTGGCGGCGG
CTGGTGGCCT TCGCGGCGCG CTACTACCAG CGGGCGTTGG GCGAGGTGGC GCTCGCCGCC
CTGCCGCCGC AGTTGCGCGA CCTCACGCCC GCGCAGCTCG CGCGGCGCCT GCGCCGCGCG
CCGGCCGCCA CCGCCGGGGA AGCCGCGCCG CCCTATGCAC CCGAGCCCCA CGCCCTGAGC
GCCGAACAGC AGGCGGCCAC GGACGCCATC GCCGCCCGGC CCGGACCCTT CCTGCTCTAC
GGCAGCACGG GCAGCGGCAA GACCGAGGTG TACCTGCGCT GCGTGCAGCA GGCCCTGGCC
GCGGATCCCT CCGCCCAGGT GCTGGTGATG GTGCCGGAGA TCAACCTCAC GCCGCAGCTG
GAGGCGCGGT TCCTCGCCCG CTTCGCGCCA CTCTACGGGG CGGACAGCGT GGTGTCGCTG
CACAGCGGCA TGACCCACCC GCAGCGGCTG AAAAGCTGGC TGGCCGCGCA TGCCGGCCAG
GCGCGCATCG TGCTGGGCAC GCGCATGGCG GTGTTCGCGA GCCTGCCGGG CCTGGCGCTC
ATCGTGGTGG ACGAGGAGCA CGACGCGAGC TACAAGCAGC AGGAAGGCGC GCGCTACTCG
GCGCGCGACC TGGCCATCTG GCGCGGGCGC GAGCAGGACG CGAAGGTGAT CCTCGGCTCG
GCCACCCCGT CACTGGAGAG CTGGCACGCG AGCCGCCCGC CCACGGACGG TGACCCCGGC
GGGCGCTACC TGCGGCTGCA CATGCCCAGC CGGATCGGCG CGGGCGCGCT ACCGCGCGTG
CGGCTGGTGG ACATGGCGCA GCAGCCGCGC GGCGCCGTGT TCTCGCCGCC GCTCGTGGCC
GCCATCACCG AGCGCGTGGA GCGCGGCGAA CAGTGCCTGG TGCTGCTCAA CCGCCGCGGC
TTCGCCCCGG TGCTGCACTG CACGGAGTGC GGCTGGAAGA GCGACTGCCC GCACTGCAGC
GCCCACCAGG TGTTCCACAA GATCGACCGC TCGCTGCGCT GCCACCACTG CGGCTTCGCG
CAGCGCGTGC CCTACGCCTG CCCCGGCTGC GGCAACCCGG ACATCGCGCC GATCGGGCGC
GGCACCGAGC AACTGGAAGA GCAGTTGGCC GCGCTGCTGC GCAACGTGAT CACGCCGGAG
CGCCGCGCCG CGCGCGTGGC CCGCATCGAC GCCGACACCA CGAAAGCCAA GGGCGCGCTG
GAAGAACAGC TCGCCCAGGT GCATGCGGGC GAGGTGGACG TGCTGGTGGG CACGCAGATG
GTCGCCAAGG GACACGATTT CCGGCGCATC ACGCTGGTGG CGGCGGTACA GCCGGACGGC
GCGCTGTTCT CCAGCGATTT CCGGGCGCCC GAGCGGCTGT TCGCGCTGCT CATGCAGGCG
GCGGGCCGTG CGGGCCGGGA CGCGGGCTAC GTGGCCGCCC AGGGTGGCGC CTGCGAGATG
TGGGTGCAGA CCTACCACCC CGACCATGCG GTGTACGCGG CGCTGCGCCG GCACGACTAT
CCGGCCTTCG CCGCGCGGCA GCTCGCCGAG CGCGCCGAGG CCGCCATGCC GCCCTTCGCA
TTCCAGGCGC TGGTGCGTGC CGACGCGCGC ACGCAGGAGG TGGCGCAGAC CTTCCTGGCC
GCCTGCGCCG AGGCGGCCCG GCAGGCGGGC CTTCCGGGGC TGGAGCAGGT GACGGTGTTC
CCGCCCGTTC CCCTGGCGAT CCAGCGCGTG GCCAACGTGG AGCGCGCGCA GATGCTGCTG
GAGAGCCCGA GCCGCGCGGC GCTGCAGCGC TTCCTGGCGG CCTGGCAGCC GCTGCTGCAT
GCCTGCCGCG CGGACCCGGC GCACCGGGGG CTGGTGCGGT GGCTGGTGGA CGTGGATCCG
CTGGCGATCT GA
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| Protein sequence | MYRDAHKVIH TPARKPSVHP AAACGRLGRR PALASVPSVS QPLSRVPSDA SPPAATDGGA
IVSVAVQTPA HSAVGGPLSY ASAHPLEPGT LVRVPLGTRE VLGVVWDAPA DAPELPRGAA
VRPVAGVLEG LAPLDAAWRR LVAFAARYYQ RALGEVALAA LPPQLRDLTP AQLARRLRRA
PAATAGEAAP PYAPEPHALS AEQQAATDAI AARPGPFLLY GSTGSGKTEV YLRCVQQALA
ADPSAQVLVM VPEINLTPQL EARFLARFAP LYGADSVVSL HSGMTHPQRL KSWLAAHAGQ
ARIVLGTRMA VFASLPGLAL IVVDEEHDAS YKQQEGARYS ARDLAIWRGR EQDAKVILGS
ATPSLESWHA SRPPTDGDPG GRYLRLHMPS RIGAGALPRV RLVDMAQQPR GAVFSPPLVA
AITERVERGE QCLVLLNRRG FAPVLHCTEC GWKSDCPHCS AHQVFHKIDR SLRCHHCGFA
QRVPYACPGC GNPDIAPIGR GTEQLEEQLA ALLRNVITPE RRAARVARID ADTTKAKGAL
EEQLAQVHAG EVDVLVGTQM VAKGHDFRRI TLVAAVQPDG ALFSSDFRAP ERLFALLMQA
AGRAGRDAGY VAAQGGACEM WVQTYHPDHA VYAALRRHDY PAFAARQLAE RAEAAMPPFA
FQALVRADAR TQEVAQTFLA ACAEAARQAG LPGLEQVTVF PPVPLAIQRV ANVERAQMLL
ESPSRAALQR FLAAWQPLLH ACRADPAHRG LVRWLVDVDP LAI
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