Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4452 |
Symbol | |
ID | 4666559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 4948440 |
End bp | 4949963 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639825643 |
Product | hypothetical protein |
Protein accession | YP_972766 |
Protein GI | 120613088 |
COG category | [S] Function unknown |
COG ID | [COG3333] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0697965 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAATTGC TCGACAACCT CTGGCTGGGA CTGCAGGTCG CCTCGCAGCC CAGCACCCTC GCGTACTGCT TCTTCGGGGT GTTCCTCGGC ACCCTGGTGG GCGTGCTGCC CGGCATCGGG GCGCTCGCGG CCATCTCGCT GCTGCTGCCC ATCACCTACC ACATCCCTCC CACGGCGGCG ATCATCATGC TGGCCGGCGT CTACTACGGC GCCCAGTACG GCGGCTCCAC CGCGGCGATC CTGCTGAACC TGCCCGGCAC GCCGTCCTCC GCGGTGACCT GCCTGGACGG CTACCCCATG GCCAGGAAGG GGCGCTCCGG CCTGGCGCTG TTCGTCACCA CCATCGCCTC GCTGGTCGGC GCGATGTCCG GGCTCGCCCT GCTCGTGCTG TTCTCGCCGA TGATCGCGGA GGTCGGCCTG AAATTCGGGC CGGCCGAGTT CTTCTCCATG ATGGTCCTGG GCCTGGTGGC CGCCTCGTCG ATGAGCGAAG GCTCCGCCGC CAAGGGCCTG GCCATGGTGG TGTTCGGCAT CCTGCTGGGC ATGGTGGGCA CCGACGTCAA CACGGGCGTG GCGCGCTACA GCTTCGACAT CCCCGAGCTG ATGGACGGCA TCAACCTGGT CGCGCTGGCC ATGGGCCTGT TCGGCGTGGC GGAAGTCGTG CGCTGCATCA ACTCCACCGA CACCGAGAAG CAGCCGGAGA ACATCACCAT GCGCTCCATG GTGCCCAGCC GGCAGGAGCT GAAGGAAACC GTCAAGCCCA TGATGCGCGG CTCCGCCCTC GGCGGGGCAC TGGGGGCGCT GCCCGGCGTG GGGCCGTCCA TCGCGGCCTT CATGTCCTAC GCCGTCGAGA AGCGGGTGGC CAGGGACCCC AGCCGCTTCG GCCAGGGCGC CATCGAGGGC ATCTCGGCGC CGGAATCGGC GAACAACGCG GCGGCGCAGA CCGCCTTCGT GCCCTCGCTC TCGCTGGGCA TTCCGGGCGA CGCGGTGATG GCCGTGATGC TGGGCGCGCT CATCATCCAC GGCATCAACC CGGGGCCGAT GCTGATGACG GAGCAGCCGG AGCTCTTCTG GGGCCTGATC GTCAGTTTCG CCATCGGCAA CATCATGCTG GTGCTGCTCA ACATCCCCAC CATCGGGTTG TGGGTGGCCC TGCTGCGCAT CCCGTTCTCG TGGATGTATC CGGCCATCCT GGTGTTCGTC GCGCTGGGCG TTTACAGCGT GAACAACAAC ACCTTCGACA TCTACATGGT CGCCCTGCTG GGCATCCTCG GCTATGCGCT GATGGTGCTG CGCTTCGAGC CCGCGCCGCT GCTGCTCGGC TACATCCTGG GCCCCATGGT CGAGGAGCAC CTGCGCCGCG CCATGCTGCT GTCCCGCGGC GACCCGTCCA CCTTCTTCAC CCGGCCGATC AGCGCCACCC TGCTGGCCCT GGCCGCGGCA CTGCTGGCAT GGGCCATCTG GGGCACCGTG AAGAAAACGC TGAAGGCGCG GGAAGCCCTC CGGCTCGCCG AAGCCCGGGC GTGA
|
Protein sequence | MELLDNLWLG LQVASQPSTL AYCFFGVFLG TLVGVLPGIG ALAAISLLLP ITYHIPPTAA IIMLAGVYYG AQYGGSTAAI LLNLPGTPSS AVTCLDGYPM ARKGRSGLAL FVTTIASLVG AMSGLALLVL FSPMIAEVGL KFGPAEFFSM MVLGLVAASS MSEGSAAKGL AMVVFGILLG MVGTDVNTGV ARYSFDIPEL MDGINLVALA MGLFGVAEVV RCINSTDTEK QPENITMRSM VPSRQELKET VKPMMRGSAL GGALGALPGV GPSIAAFMSY AVEKRVARDP SRFGQGAIEG ISAPESANNA AAQTAFVPSL SLGIPGDAVM AVMLGALIIH GINPGPMLMT EQPELFWGLI VSFAIGNIML VLLNIPTIGL WVALLRIPFS WMYPAILVFV ALGVYSVNNN TFDIYMVALL GILGYALMVL RFEPAPLLLG YILGPMVEEH LRRAMLLSRG DPSTFFTRPI SATLLALAAA LLAWAIWGTV KKTLKAREAL RLAEARA
|
| |