Gene Aave_4346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4346 
Symbol 
ID4668560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4829161 
End bp4829811 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content73% 
IMG OID639825532 
ProductDSBA oxidoreductase 
Protein accessionYP_972660 
Protein GI120612982 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3917] 2-hydroxychromene-2-carboxylate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCACA TCGTCTTCTA CCTGGACTTC GTTTCGCCAT ACGCGTGGCT GGCCTTCGAG 
CGCCTGCCGC AGGTGCTCGA GGGCCTGAGC CATTCGGTCG AGTACCGGCC CGTGCTGCTC
GGCGCGCTGC TGCAGCAGCA TGGCAACCCC GGGCCGGCCG GTATCGCGCC CAAGCGGTCC
TGGACCTACC GCCATGCCGA ATGGCTCGGC CATGCGCTGG GTACCGGGCT GGACATGCCG
GCGCGGCATC CCTTCAATCC GCTGCCCCTG CTGCGCCAGT CGCTGGCCTG CAGCGAGGAC
GGGGCCGTCA ACCGCTTCGT GGCCGGCACG GTGCTGCGCC ACGTATGGCT CGGCGGCGCC
GACGCGCTGG ACCCCGGTCG GCTGGAGGAC CTGGCAGCGG TGCTCGCGCC GCAGCGGCGC
GCGGAAGCGC CGGGCGAGGA GCCGGGCGCG CGTGCCAAGG CGCTGCTGCG CGCGAACACC
GACGCGGCCG CAGCGCAGGG CGTGTTCGGC GTGCCCGCCT TCGTGGTGGA CGGCCAGCTC
TTCTGGGGGC TGGACAGCCT GCCCATGCTG CGCGCCCGCC TGGAAGGCGA CCCGTGGTTC
GAGGGGCCGC GCTGGGACGC GGTGGCGGAG CTCCCTTCCG GGTTGAAGTA G
 
Protein sequence
MKHIVFYLDF VSPYAWLAFE RLPQVLEGLS HSVEYRPVLL GALLQQHGNP GPAGIAPKRS 
WTYRHAEWLG HALGTGLDMP ARHPFNPLPL LRQSLACSED GAVNRFVAGT VLRHVWLGGA
DALDPGRLED LAAVLAPQRR AEAPGEEPGA RAKALLRANT DAAAAQGVFG VPAFVVDGQL
FWGLDSLPML RARLEGDPWF EGPRWDAVAE LPSGLK