Gene Aave_4294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4294 
Symbol 
ID4665229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4766839 
End bp4768458 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content71% 
IMG OID639825480 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_972608 
Protein GI120612930 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCCG TCACATTCCT TCGCTCCCTC TCGATTTCGC GCCGGCTGTT CCTCGGCTTC 
GGATGCATGC TGGCCTTGCT GGTGGCCGTG GCGGCCCTGG GCCACTTCTC CATGTCGGGC
ATGAACCGGC AGATGCAGCA GATCACCGGC CCGGGCGCAG CCAAGGCCCG GCTGGCCAAC
GACATGCTGC AGACCGTGAG CGCCACGGGC ATCCATGCGC GCTCGGCCGC GATGCTGGGC
GACATCGACA GCCGCAATGC CGAGGTCCAG GCCCGCAAGG CATCCGAAGC CCTGCAGCAG
TACGCCCGGC AGGAGGCCGA ACTCGCGGCG CTGCTGGAGT CCGGCGGCGC GTCGCCCGAG
GAGCGCCAGC TGATGGCGGA CATCCAGGCA CAGTCCCGCA AGACCCGCCC CGAGATCGAA
GGCGCGCTCA AGCTGGTCAC CGACGGCGAC ACGGTCAGCG CCACCCTCGG CCTGATGACC
CGCGTGGCGC CGCCCGAGGC GGCATGGCGC GACAAGCTGG CGCAACTGGT GGAGCTGCAC
AACGTCCTCA ACGCCAACGC CGCGGCCGAC GCGCAGCAGA CCCAGACCCG CTCGCGCCTG
ACCGGCGGCA CGCTGGTGGC CATCGCCATC GCCCTGGGCC TGTTCATCGC CTGGCGCACC
ACGGCCACCA TCACCCAGCC CATCGGGCGG GCCGTCGTCG TGGCCGAGCG CATCGCGCGC
GGGGATCTCA CCTCCCGCGT GGAAGTCCGC ATCCACGACG AGACCGGACG CCTGCTGGAC
GCGATCGCGG CGATGCAGGA GCAGTTGCGC GCCCTCGTGG GGCACATCGG CACCACCGCC
GACTCCATCC TGCTTGCCAG TTCCGAGGTC GCATCCGGCA ACCTGGACCT GAGCCACCGC
ACGGAGCAGA CTTCCAGCTA CCTGCAGGAG ACCGCCTCCG CCCTGGAAGA CCTGACCCAG
ACCGTCCACC AGGGCGCCGA TGCCGCCCGG CAGGCCAACC AGATGACGGC CTCGGCCGCG
CAGGTCGCCA CGCGCAGCGG CGAGGTGGTT TCCCAGGTCG TGCGCACCAT GGACGTGATC
AGCGCCAGTT CCCGCAAGAT CTCGGACATC ATCGGCGTGA TCGACGGCAT CGCCTTCCAG
ACCAACATCC TGGCGCTCAA CGCCGCGGTG GAGGCCGCCC GCGCGGGCGA GCAGGGACGC
GGCTTCGCCG TGGTGGCAGG CGAGGTGCGC GCCCTGGCGG GGCGCAGCGC CGAAGCCGCC
CGCGAGATCA AGGCGCTGAT CCTCGCCAGC TCCGGGCAGG TGCAGGAAGG CTCCGGCCTC
GTCGCCCAGG CGGGTGCCAC CATCGGGGAA CTCGTGCAAT CCGTGCAGAA GGTGTCGTCC
ATCATGGGAG AGATCACCAC CTCGGCCCAC GAGCAGAGCG ACCGCATCGG CCAGGTGAGC
CAGTCCGTGA GCGCCCTGGA GAACATGACC CAGCAGAACG CCGCGCTGGT GGAGGAAAGC
AGCGCGGCGG CGGGCAGCCT GCGCGAGCAG GCCGGCCGCC TGACCGAGAT GGTGGGAGCC
TTCCGCCTGC AGCGCGACGC CTCGGGCGCC GCTCCACTCA CGCCCGCGCT GCCGGGCTGA
 
Protein sequence
MQAVTFLRSL SISRRLFLGF GCMLALLVAV AALGHFSMSG MNRQMQQITG PGAAKARLAN 
DMLQTVSATG IHARSAAMLG DIDSRNAEVQ ARKASEALQQ YARQEAELAA LLESGGASPE
ERQLMADIQA QSRKTRPEIE GALKLVTDGD TVSATLGLMT RVAPPEAAWR DKLAQLVELH
NVLNANAAAD AQQTQTRSRL TGGTLVAIAI ALGLFIAWRT TATITQPIGR AVVVAERIAR
GDLTSRVEVR IHDETGRLLD AIAAMQEQLR ALVGHIGTTA DSILLASSEV ASGNLDLSHR
TEQTSSYLQE TASALEDLTQ TVHQGADAAR QANQMTASAA QVATRSGEVV SQVVRTMDVI
SASSRKISDI IGVIDGIAFQ TNILALNAAV EAARAGEQGR GFAVVAGEVR ALAGRSAEAA
REIKALILAS SGQVQEGSGL VAQAGATIGE LVQSVQKVSS IMGEITTSAH EQSDRIGQVS
QSVSALENMT QQNAALVEES SAAAGSLREQ AGRLTEMVGA FRLQRDASGA APLTPALPG