| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4205 |
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| Symbol | |
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| ID | 4666649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 4659835 |
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| End bp | 4661763 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639825391 |
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| Product | sensor diguanylate cyclase |
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| Protein accession | YP_972519 |
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| Protein GI | 120612841 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.952942 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCGCA TCAATGCAAT GCGGCGCCGG GCGGCCTGCG GCACAATCCG CCGCTGCCTT
TTCCTTTCCA GTCCTCGCCC GTGCCGCGGC CCCTGCGCCA GGCCATTGCG TCCCGTGCCG
GTTTTTCCTT CCGCCCGCCT GCTGCTTTTG CGCACCGCCG CGCGGTGCGG CGGCGCGCTG
GCCGCCGCCC TGGCGTGGCT GTGCATGGTC CTCGTGGCGC CCGCCGCGCA GGCGGCAGCC
GTCGAGCCTG CGGGGCTCGC AGCGCGCGAG GGCGGAATTT CGCTCGTACC CCACATGGAG
GTGCTGGAGG ACCCCGGCCG ACGCCTCGGG ATCGGCGACA TCCTCGCGCC GGAGAACGCG
GCACGCTTCG CCCATCCCGA CGATCCCCTG CGTGGCGCCG AGGCCGACCG GGTGCTCTGG
TTCCGCGTGC AGCTGCGCCT GGCCGATCCG GCGGACGCCC TGCGCGAATG GCTGCTGGTC
GTGCCCACGG TGTCCACCCA CGATCTGCGC TTCTACGGGC CCTACGGCCC GGACGGCCGC
GCGCTGGCGC CGCCCGTGGT GACGGGCATG CGCCATCCGT GGGCCACGCG GCCGGCGGGA
TCGGAGCAGA TGGCCTGGCG CTTCCGGCTG CCGGACGAGC GGACGTACAC GGCGTACTTC
CGCGTGGAAT CGACCTTCGC CCGTTTCTAT GCCGCCAGGG CCTGGGATCT GGCCGACTAC
CTGCAGGCCA CGCAGGACAA GCGCATGTTC GACGGTGCCT GCTATGGCCT GCTGCTGGGC
CTGCTGGCCT TCAGCCTCGC GATGCTGCTG GTGTTCCGCG AGGGCATCTA TGCCTGGTAT
TCGCTCTCGT GCGCCTGTGC CCTGCTGGCG CTGGCCAGCC TGAACGGGCA CACGCTGCGC
TATCCGTTCG CCCACTGGCC GGCGGCAGCG GGCCTCTTCT ACACCCTGGC GCCGCCGCTT
TGGGCCATGT CCAAGCTGCT GTTCGGGCGC AGCCTGCTGC GCCTCTCGCA CTACGCGCCG
CGCATCGATC GCCTGGTGCT CGCACTGGTC GCGGCGCTGG GCGCGGCGAC CGTGTACGGG
CTGTCCGGCC CCCATCCGCT CTGGCTGTTC CGGGCCGTGC AGGCGTCGGT GATGGTGTCC
ACCGTGGTGC TGGCCGCCGG CGCGCTGATC GCGATGCGCA GGCGCTACTG GCCCGCCGTG
CTCTACAGCG CCGGCGTGCT GCTGCTGTTG CTGGGCATCT GCGCGATCAT CGTCGCGAGC
TGGGGCTGGG TGGCCTGGAC GCCGGGCCAG ATGGACCTGA CACAGGCCGC GCTCGTGGCG
GAAACCGTCA TCTTCGCCGC CGCCATGGCG TCGCGGCTGC GCATGCTCCG CATGTCCGAG
CAGGCGCTCG GCCGGCGTAC CCGCGAACTG GTGGAGGTGC TGGGCACGGA CGCCCTCACG
GGCGCGGCGA ACCGCGCCGG ACTGGCGGGC CGTGCCGGGG CGGCCCTGGA GGCCGGCGAG
CCGTTCACGC TCATGCTGCT GGACCTGGAC GGCTTCAAGG CCGTGAACGA TACCTACGGC
CATGCGGCGG GCGACGCCGT GCTGGTGGCC CTGGTGCAGC GCCTGCGCGC CCTGCTGCGC
GAAGGCGACC TGATCGCACG CCTGGGCGGC GACGAATTCG CCGTGCTCCT GGCCGGATCA
CCGCCGCGCA CGGCCCTCGC GGACAAGGCC CGCGCCATGG CCCATGCCGT GGCCGTGCCC
CTCGGCTTCG AAGGCCGGAA CCTGTCGGTG GGCCTCAGCG TGGGCATCGC CAGCCATCCC
GGCGACGGCC AGACCCTGGA ATCCCTGCTG CGCGCCGCCG ACGCCGCCAT GTACGCCAGC
AAGCGCCGCG GCCCGCAGGC CGGGGCGGAG TGCTTCGCCT TCGCGAGCGA CTTGCCCCCG
GCGCCCTGA
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| Protein sequence | MPRINAMRRR AACGTIRRCL FLSSPRPCRG PCARPLRPVP VFPSARLLLL RTAARCGGAL
AAALAWLCMV LVAPAAQAAA VEPAGLAARE GGISLVPHME VLEDPGRRLG IGDILAPENA
ARFAHPDDPL RGAEADRVLW FRVQLRLADP ADALREWLLV VPTVSTHDLR FYGPYGPDGR
ALAPPVVTGM RHPWATRPAG SEQMAWRFRL PDERTYTAYF RVESTFARFY AARAWDLADY
LQATQDKRMF DGACYGLLLG LLAFSLAMLL VFREGIYAWY SLSCACALLA LASLNGHTLR
YPFAHWPAAA GLFYTLAPPL WAMSKLLFGR SLLRLSHYAP RIDRLVLALV AALGAATVYG
LSGPHPLWLF RAVQASVMVS TVVLAAGALI AMRRRYWPAV LYSAGVLLLL LGICAIIVAS
WGWVAWTPGQ MDLTQAALVA ETVIFAAAMA SRLRMLRMSE QALGRRTREL VEVLGTDALT
GAANRAGLAG RAGAALEAGE PFTLMLLDLD GFKAVNDTYG HAAGDAVLVA LVQRLRALLR
EGDLIARLGG DEFAVLLAGS PPRTALADKA RAMAHAVAVP LGFEGRNLSV GLSVGIASHP
GDGQTLESLL RAADAAMYAS KRRGPQAGAE CFAFASDLPP AP
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