| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4120 |
|---|
| Symbol | |
|---|
| ID | 4669070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 4577825 |
|---|
| End bp | 4578577 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639825307 |
|---|
| Product | bacteriophage DNA transposition B protein |
|---|
| Protein accession | YP_972435 |
|---|
| Protein GI | 120612757 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2842] Uncharacterized ATPase, putative transposase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00000206213 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACAG GGTTCGTCAA AACGGAGAAT TTCCGCCGGT TGGCCGAGGC GCAGAAGCTG
GTGGAGCGCC GCGGTGCGCG CGAAGCGGGC CTCGTGCTGG TCAAGGGGCC ATATGGCATC
GGCAAGTCCG AGCTGACGGA GCGCTGGGCC ACCGACAGCG GCTGGATCTT CGTCCGCGCC
AAGGCGACGT GGACGAAGCG CGCCATGCTC GATGAGCTGG CCGACCTGAT GGGCGTATCG
AAGACCGGGC GCAATCAGGA GGTGCAGGCC CGCATCATCG GCAAGCTGGC CGTGGACATG
GTCCCCATGA TCATCGACGA GGCCGACTTC CTCGTCGGCT CCACGGCAAG TCTGCTGGAG
GTGGTGCGCG ACATCACGGA CATCACCGGC ACCATGTGCT TCCTGGTGGG CATGGAGCAA
TTCGCGCTCA AGGTCGCGCG CCACGGCCAC ATCGCCAGCC GCGTGGGGAA GGTGGTCGAG
CTGCAGCCGC TTTCGCTCGC GGACGTCAAG GCCACGGTCA CAGCCAAGAG CCAGGTCGCC
ATCGACGACG CCGTGCTGCC GATCATCCTC GAGCAGAGCG CCGGCCGCAT GCGCCTGGTG
CTCGGCGCGA TCGCCAACCT CGAAGCCTGG GCCGATGCCA ACCGCTGGGA GCGCATCACG
CTCGAGCACG TCGCACGTCG CGCGCTCTGC ACCGAATTCA GCGGCAAGAG CCTGGGCCGC
CGCGCCCCCA CGCTGGGAGG TGACGCAGCA TGA
|
|---|
| Protein sequence | MKTGFVKTEN FRRLAEAQKL VERRGAREAG LVLVKGPYGI GKSELTERWA TDSGWIFVRA
KATWTKRAML DELADLMGVS KTGRNQEVQA RIIGKLAVDM VPMIIDEADF LVGSTASLLE
VVRDITDITG TMCFLVGMEQ FALKVARHGH IASRVGKVVE LQPLSLADVK ATVTAKSQVA
IDDAVLPIIL EQSAGRMRLV LGAIANLEAW ADANRWERIT LEHVARRALC TEFSGKSLGR
RAPTLGGDAA
|
|---|
| |