Gene Aave_4110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4110 
Symbol 
ID4668310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4568376 
End bp4570046 
Gene Length1671 bp 
Protein Length556 aa 
Translation table11 
GC content67% 
IMG OID639825297 
Productphage uncharacterized protein 
Protein accessionYP_972425 
Protein GI120612747 
COG category 
COG ID 
TIGRFAM ID[TIGR01630] phage uncharacterized protein (putative large terminase), C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000229879 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGAAGA GCCCCAAGCA ATTCCTGGCT GACCTGGCGT CGCTCGCCGA TGGCCTGCGC 
CGCCAGATCG ACGCAAACCT CGACGGCTGG GACATGAGCC CCGAGGCCAT CGCCGATCGG
CGCCGCAAGG TCTGCGATCC GGTGAGCGGC TACGAATACT GGGACCGCAA CTACTTCCCG
CACTACGGCC GCGCCGAGCC CAGCGCGCTG CACCTCTACC TCTACAAGCG CCTGCCCGAG
ATCATCGCGA GCAATTCGGG CCAGCGCGAT GCGCTGGCCG CGCCCCGCGG CGAGGCGAAG
TCCACGAAGA TCAGCATGAG CTTCGTGGCC TGGTGCGTGG TCACGGAAAA GCTCTGGTAT
CCGATCATCG TGATGGACGC CTTCGAGCAG GCGGCGGAAA TGCTGGAGGC CATCAAGGCG
GAGCTGGAGG CCAACCCGCG CATCGCGGGC GACTTCCCCG AGGCGTGCGG TCAGGGCCGC
GTCTGGCGAG CGGGCGTCAT CGTCACACGC AACGGCCGCA AGGTGGAAGC CTTCGGCTCG
GCCAAGAAGA TCCGGGGCCG CCGCCATGGT GCCCATCGCC CCGACCTGGC CGTGATGGAT
GACATCGAGA ACGATGAGAA CGTCACCACG CCGGCCCAGC GCGACAAGCT GCAGAAGTTC
GTCACCGCGA GCGTGCTCAA CCTGGGGCCG CCGGACGATT CGATGCACGC CATACTGGTG
GGCACGGTGC TGCACTACGA CTCGGTGCTC GCGCGGTTTC TGAAGAATCC GCTGTGGAAC
AAGAAGGTGT TCAAGGCCGT GATCAACTGG CCCGAGAACA TGCACCTGTG GGAGCAGTTC
GAGGGGCTGC TGCTGGGCGC TGACACGCCG CAGCGCGGCG AGGCCGAAGC CATGGCGCTG
TACCGCCAGC ACCAGGCAGA GATGGACAAG GGCGCGGTGG TGAGCTGGCC CGCGCTGCGC
CCGCTGGTCA AGCTGATGAT CCGCCGTGCG CGCGAAGGGC ACGCAGCCTT CGACAGCGAG
CAGCAGAACG ATCCGGTGGC CGGCGAGGAT GCTCCGTTCG CCAACAGCAT CCGCTTCTGG
GTCAACCGCG CGGCCGAGTG GGTCTTCTAC GGTGCCTGCG ATCCCAGCTT GGGAAGGGCA
GGGAACAGCC GCGATCCGAG TGCGATTGGC GTGGGCGGCT ACAACCGGGA AACGGGCGTG
CTGGATGTGG TCGAGGCAGC CATCAAGAAG CGCGTGCCCG ACCGGATCAT CAGCGATGTG
ATCGAGATGC AGCGCGAGTA CGGCTGCGTC GTGTGGGGCT TCGAGTCCGT CCAGTTCCAG
GAATTCCTGC GCACCGAGCT GGTCAAGCGC AGCGCGCTGC TCGGGGTGCC CGTGCCGGCG
CGAGGCCTGA TTCCCATCAG CGACAAGCTG CTGCGCATCG AGAGCCTGCA GCCGCACATG
CACAACGGCT TGCTCCGGTT GCACAGCAGC CAGACCACGC TGATCGATCA GTTCCGCCAC
TTCCCCAAGG CCGATCACGA CGACGGCCCC GACATGGTCC AGATGCTGTG GATGCTGGCC
GTGACGGGTG GCATGGCTGC AGCCGCTCAG GGCGGCAGCT CCCGCCAACC CCAATCCGCG
CGAGAGCGCT ACGCGCGCCA GGCGGCGCGC ATGTTCCGGA AGCAACGATG A
 
Protein sequence
MAKSPKQFLA DLASLADGLR RQIDANLDGW DMSPEAIADR RRKVCDPVSG YEYWDRNYFP 
HYGRAEPSAL HLYLYKRLPE IIASNSGQRD ALAAPRGEAK STKISMSFVA WCVVTEKLWY
PIIVMDAFEQ AAEMLEAIKA ELEANPRIAG DFPEACGQGR VWRAGVIVTR NGRKVEAFGS
AKKIRGRRHG AHRPDLAVMD DIENDENVTT PAQRDKLQKF VTASVLNLGP PDDSMHAILV
GTVLHYDSVL ARFLKNPLWN KKVFKAVINW PENMHLWEQF EGLLLGADTP QRGEAEAMAL
YRQHQAEMDK GAVVSWPALR PLVKLMIRRA REGHAAFDSE QQNDPVAGED APFANSIRFW
VNRAAEWVFY GACDPSLGRA GNSRDPSAIG VGGYNRETGV LDVVEAAIKK RVPDRIISDV
IEMQREYGCV VWGFESVQFQ EFLRTELVKR SALLGVPVPA RGLIPISDKL LRIESLQPHM
HNGLLRLHSS QTTLIDQFRH FPKADHDDGP DMVQMLWMLA VTGGMAAAAQ GGSSRQPQSA
RERYARQAAR MFRKQR