Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4071 |
Symbol | |
ID | 4665993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 4523097 |
End bp | 4523789 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639825258 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_972386 |
Protein GI | 120612708 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAATC TCGACTTTTC CTTCTACAGC TGGGACATCA TCAGCAAGTT CGTCGTCAAG GGCTTCTATT TCAGCTTCAT GCTGACGCTG ATCGCCACGA TCGGCGGCAT CCTGCTGGGC ACCGTGCTGG CACTGATGCG CCTTTCGGGC AGGAAGTGGC TGGACGTGCC GGCCACCATC TACGTCAACG GCATGCGCAG CATCCCGCTG GTGATGGTGA TCCTGTGGTT CTTCCTGCTG GTGCCGGCTT CGTTCTATGC GGCCCTGCCC GGCGGGATCG GCTCGAGCTA CCGCTCGGAG TTGTCGGCCA TCATCACCTT CATCGCCTTC GAGGCGGCCT ACTTCAGCGA GATCATGCGG GCCGGCATCC AGTCCATCCC GCGCGGCCAG GTGTTCGCAG GCCAGGCGCT GGGTATGACC TACGGCCAGA ACATGAAGAT CGTGATCCTG CCGCAGGCGT TCCGCAATAT GCTGCCGGTG CTGCTGACAC AGACCATCAT CCTGTTCCAG GACACGTCGC TCGTGTATGC CATCGGCGCC TACGACATGC TCAAGGGCTT CGAGACCGCC GGCAAGAACT ATGGCCGCCC GATCGAGGCC TACCTGCTGG CCGCGGTCGT GTACTTCATG ATGTGCTTCG CGCTCTCCTG GGCGGTGAAG CGCCTGCACC GCAAGATCGC CATCATCCGC TGA
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Protein sequence | MMNLDFSFYS WDIISKFVVK GFYFSFMLTL IATIGGILLG TVLALMRLSG RKWLDVPATI YVNGMRSIPL VMVILWFFLL VPASFYAALP GGIGSSYRSE LSAIITFIAF EAAYFSEIMR AGIQSIPRGQ VFAGQALGMT YGQNMKIVIL PQAFRNMLPV LLTQTIILFQ DTSLVYAIGA YDMLKGFETA GKNYGRPIEA YLLAAVVYFM MCFALSWAVK RLHRKIAIIR
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