Gene Aave_4059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4059 
Symbol 
ID4669432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4509070 
End bp4510071 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content70% 
IMG OID639825246 
Productribosomal RNA methyltransferase RrmJ/FtsJ 
Protein accessionYP_972374 
Protein GI120612696 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0332012 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCGG ATGTGTTTTT GGTGGAGCGC GGCCATGCCG CCACACGGTC GCAGGCGCAG 
CGCCTGATCG CGGCCGGTGT GCAGTGGCGC CTGGCGGCCG GCATGGCGTG GACGAAGGTG
GCGAAGAACG GCGACGACAT CCCGGCGATC GCCGAGGTCG AGTTGCTGGA CGGGGCCGAG
GCCCGGTATC TGTCGCGCGG CGGGCTCAAG CTGGAAGGGG CGCTGCAGGC CACCGGGTTG
TCGGTGGCCG GGCGGCGCTG CCTGGACGTG GGGCAGAGCA CGGGCGGTTT CACCGATTGC
CTGCTGCAGC ACGGCGCGGC GCAGGTGATC GGCGTGGACG TGGGCCATGG ACAACTGCAC
GAGCGGCTGC GCGATGATCC GCGCGTGGTG GGCGTGGAAG GGCTGAACGC CCGCTCCATG
ACCGCCGAGT CGCTGCAGGA GGCCTGCGAA GAGGCATTGT CCGAACGCGT CGAACGCGAC
GTGGAGGACA ACGAGACCCA GCCCGTGGCG CCCTATGCGT GGATGCGAAA CGGCGGCCAG
GTGGACGACG AGTACGACGA CAGCGACGAT GCCAAGGAGC ACGAGGTGGA GGCCTTCAAG
GCCGAGCGCG AGGCCAGGGC GCGCGCGCGT GCCGAGGGTG CGCTGCCCAC CGAGCTGCGC
CGCCGTGCGG GACGCGAGGA CGTGGACATC ACGCCCGAAT TCGATCTCGT CACCGGCGAT
GTGTCCTTCA TCTCGCTCAC GCTGATCCTG CCGGCCGTGG TGCCGCTGCT CAAGGCGGAC
GGCGAGCTGC TGATGCTGGT CAAGCCGCAG TTCGAGCTGC AGCCGGGGCA GGTGGGCAAG
GGCGGCATCG TGCGCGACCC GGCCCTGTAT GCCCAGGTGG AGCAGCGCCT GCGCGAATGC
TGCGCCGCGG CGGGCCTGGA CGTGGCCGGG TGGCACGACA GCCCGATCGA CGGCGGCGAC
GGCAACCGCG AATTCTTCAT CCACGCAAGG AGGAAGGCAT GA
 
Protein sequence
MRADVFLVER GHAATRSQAQ RLIAAGVQWR LAAGMAWTKV AKNGDDIPAI AEVELLDGAE 
ARYLSRGGLK LEGALQATGL SVAGRRCLDV GQSTGGFTDC LLQHGAAQVI GVDVGHGQLH
ERLRDDPRVV GVEGLNARSM TAESLQEACE EALSERVERD VEDNETQPVA PYAWMRNGGQ
VDDEYDDSDD AKEHEVEAFK AEREARARAR AEGALPTELR RRAGREDVDI TPEFDLVTGD
VSFISLTLIL PAVVPLLKAD GELLMLVKPQ FELQPGQVGK GGIVRDPALY AQVEQRLREC
CAAAGLDVAG WHDSPIDGGD GNREFFIHAR RKA