Gene Aave_4038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4038 
Symbol 
ID4666063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4489608 
End bp4490330 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content73% 
IMG OID639825225 
Producthistidine kinase 
Protein accessionYP_972353 
Protein GI120612675 
COG category[T] Signal transduction mechanisms 
COG ID[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.642823 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCCG CGCACGACGA GTTTCTGCAC GCGGTGTCCC ACGATCTGCG CGCACCGCTG 
CGGCATATCG TGTCCTTCGG CCCGCTGGTG CGGGAACTGG TCGAGGACGA GGCGCAGGGC
CTGCCCGCCG GGGCGCGTGC GGAGGCCTGC AGTTTCCTGG GCACCATGGA CCAGGCTTCC
CGCCGCATGG GCCGCATGCT CGACGGCCTG CTCGCGCTCT CGCGCATCGC CCGCGCGCCG
CTGCACCGGG CACCGGTGGA TCTGAACGAA CTGCTGGCCG GCATGCCGTC CGCGCTGGCC
GGCGAGGCGC CCGGCCGCCG CGTGGAGTGG CGCATCGCCC CCGGCCTGCC GACAGTGGCG
GGCGATGCCG CGCTGCTCCG CCAGCTGTTC AACGAGCTGC TCGGCAATGC GCTCAAGTTC
ACGCGCGACC GCACGCCGGC CATCGTCGAG ATCGAAGGGG ACGTCGCCGG GGACGGATCG
GCCCGGCTGG CGGTGCGCGA CAACGGCACG GGTTTCGATC CGGCGCGTGC CGGCATGCTG
TTCGGCGTGT TCCAGCGCCT GCACCGCGAT GCGGATTTCG ACGGCATGGG AGTGGGCCTC
GCCAAGGCGC GCGCGATCAT GCAGCGCCAC CGCGGGCGCA TCGGCATCGA CGCGGTGCCG
GGCGAAGGCT GCACCGTCGT GCTGGCATGG CCTCCCGGCG CTGCAGACGC ACCCACGCCG
TAA
 
Protein sequence
MAAAHDEFLH AVSHDLRAPL RHIVSFGPLV RELVEDEAQG LPAGARAEAC SFLGTMDQAS 
RRMGRMLDGL LALSRIARAP LHRAPVDLNE LLAGMPSALA GEAPGRRVEW RIAPGLPTVA
GDAALLRQLF NELLGNALKF TRDRTPAIVE IEGDVAGDGS ARLAVRDNGT GFDPARAGML
FGVFQRLHRD ADFDGMGVGL AKARAIMQRH RGRIGIDAVP GEGCTVVLAW PPGAADAPTP