Gene Aave_3959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3959 
Symbol 
ID4667824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4388277 
End bp4389554 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content72% 
IMG OID639825148 
Producthypothetical protein 
Protein accessionYP_972276 
Protein GI120612598 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0651947 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.676574 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCC ATCCCCTCGT TCCGGCCGTT GCCGCCGCGG TCTTCGCCGT CGCGCTGCTC 
CACACCTTCG CCGCCAGCCA GTTCGAACGG CTCTCGCGGC GCTTCCCGCG CCATGCCGGC
CTCTTCCACC TGCTCGGCGA GGTGGAGGTG GTCTTCGGCT TCTGGGCCAT CGTGCTGATC
GCCCTGCTGG CCCTGCTGCA GGGCGGCGCC GAGGCCCTCG CCTATGCGGA ATCCCGCAAC
TACACCGAGC CGCTGTTCGT CTTCGTGGTG ATGGTGGTGG CGGCGTCCCG CCCCATCCTG
GACGCGGTGA CCCGCACGGT GGAGGCCGCC GCGCGCTGCC TGCCCGTGGC ACGACCCGTG
GCCATGGCCT GGCTGGGCCT GTCGGTGGTG CCGCTGCTGG GCTCCCTCGT CACCGAGCCG
GCGGCGATGA CGCTGGCCGC CCTGCTGCTC GCGCCCGTGG CCTTCCACGC CGGCATTCCC
GAACGCGCAA AATACCTCGC GCTGGGCGTG CTGCTGGTCA ATGTCTCCAT CGGCGGCACC
CTCACCGCCT ACGCGGCGCC GCCGGTGCTG ATGGTGGCCT CGACCTGGCA ATGGGACAGC
GCCTTCATGT TCACGCACTT CGGCTGGAAG GCCGCGCTGG CCGTGGCGGC CAATGCCACG
CTCGCGGCGT GGACGCTGCG CCCGCACCTG CTGCGCCACG CCGGGCACGC GGCCGTCTCC
TCCGGCGCGC CAGACGCTGC TCAGGCCGTC CCGGCGCTGG TGTCTGCCGT GCACATCGCG
CTGCTGGCGG GCGTGGTGGT GTTCGCGCAC CATCCCGTCG CCTTCCTGGG CATGTTCCTG
CTGTTCCTGG GCTTCACGCA GGCCTATGCG CGGCACCAGA GCCCGCTGAT CCTCAAGGAA
GCACTGCTCG TCGGTTTCTT CCTCGCGGGC CTGGTGGTGC TGGGCGGCCT GCAGCGCTGG
TGGCTGCAGC CCATCGTCTC CAGTCTGGAG CCGCTGGCGC TGTTTTTCGG TGCCCTGGGC
CTGACGGCGG TGACCGACAA CGCGGCGCTC ACCTACCTGG GCTCGCTCAT CGGCGGCATC
CCGCCGCAGA GCCAGTACCT GCTGGTGGCC GGCGCGGTGG CCGGCGGCGG CCTCACGGTG
ATCGCCAATG CGCCCAACCC GGCCGGGGTG GCGCTGCTCA AGCCGGGCTT CGCGGACGGC
ACCGTCGGCG CCGGGGAGCT GCTGCTGGGC GCGCTGGTGC CCACGGCAGT GGCGGCGGCG
GCCTTCCTGG TGCTGTAA
 
Protein sequence
MDTHPLVPAV AAAVFAVALL HTFAASQFER LSRRFPRHAG LFHLLGEVEV VFGFWAIVLI 
ALLALLQGGA EALAYAESRN YTEPLFVFVV MVVAASRPIL DAVTRTVEAA ARCLPVARPV
AMAWLGLSVV PLLGSLVTEP AAMTLAALLL APVAFHAGIP ERAKYLALGV LLVNVSIGGT
LTAYAAPPVL MVASTWQWDS AFMFTHFGWK AALAVAANAT LAAWTLRPHL LRHAGHAAVS
SGAPDAAQAV PALVSAVHIA LLAGVVVFAH HPVAFLGMFL LFLGFTQAYA RHQSPLILKE
ALLVGFFLAG LVVLGGLQRW WLQPIVSSLE PLALFFGALG LTAVTDNAAL TYLGSLIGGI
PPQSQYLLVA GAVAGGGLTV IANAPNPAGV ALLKPGFADG TVGAGELLLG ALVPTAVAAA
AFLVL