| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3778 |
|---|
| Symbol | |
|---|
| ID | 4667917 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 4196689 |
|---|
| End bp | 4198077 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 639824969 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_972098 |
|---|
| Protein GI | 120612420 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACGC GCATCGCATT GCTGGTGCTG ATCCCCATGC TGCTGCTGGT GTGCGCGGGC
GGGTCGTGGC TGCGCGGCCA GATGCACCGC AGCCTGATGG ACAGCTTCGA GCAGGTGCTG
CGGGACAAGG CCCAGCGCGT GGGGGCGCGA CTGCAACTGG GCCCCGGCGG CACGCTCCGC
GAGGCTGCGG GCGGGGCGGA CGAATTCAGC GCCATCTATG CCGGCTGGTA CTGGCGGGCC
GAGGCGGGCC GCGAAGTGCT GCGCTCGCGC TCGCTGTGGG ACATGGACCG CCTGCCCACC
GATGACCGTC CCGCGGCCGG ATCGGCCGTG CTGCACCCCG CCACGGGCCC CCGGCAGGAG
CCGCTGCTGG CGCTCACGGT GCCCGTCGCC CTGGGCCAGC CTGCCGCTGC GGTGGCGCTG
ACGGTGTTCG GCCCGGCGGA GCAGTTGCAG AGCAGCGTGC GACAGATCGA CCGCAACCTC
GTGCTGGCCG GTTCGGTGCT TCTGGCCCTG GCCGGCGTGC TGGCCTGGCT GCAGGTGCGC
GTGGGGCTGG CGCCGCTGCG CCGGCTGGAA GCGCTGCTCG CAACGCTGCG GGAGCCGCAG
GGCGCCGGGG CCGGCGTGGC GGAACACCTG GCGGCCCCCA CGGGGCGGGA TCTGCAGCCG
CTGCAGAACG AACTGGCCGG ATTGCTGGCG CACAACGCGC ACGTGGTGGC CCGCGCGCGG
GCCCATGCGG TGGACCTGAA CCATGCCCTC AAGAAGCCCC TGGCGCTGCT GAACGCGCAG
GCCAGCGCGC AGCCGCAGGT GGCCAGCAGC GAAGTGCGCC GCCAGGTGGA GGCCATGGCG
CAACTCGTGG ACCGCTACCA GGGACGCACG TTGAGCGATG CCCTGCATGC CCATCCCGGC
GCGGGTGCGT CGGCGGTCGA TGTGCGCGAG TGCGTGGCCC AGGTGCTGCG GATGATGCAG
CGCCTGCATG CCGCGCAGGA GCTGGACTGG ACGCTGGAGG ACCGCGCCAC GGGCCCGGTG
CGGTGGCGCG GGGAGCGCGC GGACCTGGAG GAGGTGCTGG GCAACCTGCT GGACAACGCC
GGCAAATGGG CCGCCTCCCG GGTGCGGCTC ACGCTGTCGG CCGAACCCGC CGCCGGGCTC
GGCCGCCTGG AACTGGACGT GGAGGACGAC GGTCCCGGCA TGACGCCGGA ACAATTGCAG
GCCGCGGGCC AGCGCGGTGT GCGGTTCGAC GAGTCCATCC AGGGCAGCGG CCTGGGGCTG
GCGATCACGG GCCAGATCGC GCAGGCCTAT GGCGGCCGGC TGGCGCTCTA TCACAGCGCT
GACCTCCGGG GGCTGGGCGT GCGGCTGGAA ATGCGGGGCC TGATCCCGCC CGGGGCCGGG
GCCCGCTAG
|
|---|
| Protein sequence | MATRIALLVL IPMLLLVCAG GSWLRGQMHR SLMDSFEQVL RDKAQRVGAR LQLGPGGTLR
EAAGGADEFS AIYAGWYWRA EAGREVLRSR SLWDMDRLPT DDRPAAGSAV LHPATGPRQE
PLLALTVPVA LGQPAAAVAL TVFGPAEQLQ SSVRQIDRNL VLAGSVLLAL AGVLAWLQVR
VGLAPLRRLE ALLATLREPQ GAGAGVAEHL AAPTGRDLQP LQNELAGLLA HNAHVVARAR
AHAVDLNHAL KKPLALLNAQ ASAQPQVASS EVRRQVEAMA QLVDRYQGRT LSDALHAHPG
AGASAVDVRE CVAQVLRMMQ RLHAAQELDW TLEDRATGPV RWRGERADLE EVLGNLLDNA
GKWAASRVRL TLSAEPAAGL GRLELDVEDD GPGMTPEQLQ AAGQRGVRFD ESIQGSGLGL
AITGQIAQAY GGRLALYHSA DLRGLGVRLE MRGLIPPGAG AR
|
|---|
| |