| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3656 |
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| Symbol | |
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| ID | 4665791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 4031903 |
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| End bp | 4034473 |
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| Gene Length | 2571 bp |
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| Protein Length | 856 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639824847 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_971979 |
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| Protein GI | 120612301 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.570339 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCGA CCATTCACTC CCTTTCCCTG CTTCGTTTCC TGCGGCGCCT TCCGCGCACG
GCGCTGGCGA TGATCCTCCT GGCGGCCTGC CTGCTGGCGT GGCCGCCCGG CATGGTGCAA
GCAGCACCAC AGGTACCCGC CTCGGCCCCG GCCTCCGCCA GCAGCGCGGC GGCATCGCGG
GCCGCTGCGG CGGCGGCCGC CGGGAACATC GTCGATCCCG ACACGCCGCT GCCCTCCGTG
GACGAGCTGC GCAAGCGCCT CGAGGCCATC CCCCGCAAGC TCGGAGACCA GGACGACGGC
CGCAAGCTCG TGAACGAGGC CTACGCCGTC GGCGCCACGG CCGAGCAGGT GGTGGCCCGC
CGCACGGCCG ACCTGGCGGA CCTGGACAGC CGCCTCGCCG GACTCGGCCC CGCCCCCGAA
AAAGGCGCGC CCGCCGACTC GCCCGACGTC GTCCAGCAGC GCAGCGCCCT CGCCAAGCAG
CGCGCCACCG TCGATGCGGA CCTCAAGCTC GCGCGCCTGA TCGCCGTCGA TGCGGAACAG
CTCGGCGCCG ACCTGCTGCG CCAGCGGCGC CAGCAGTTCC AGGCCGAACT CACCGCACGC
GCCGATTCGC CCCTGGGCGC CGCCTTCTGG CGCAACCTGC GCGCCGCATG GCCCACGGAC
ACCGAGCGCC TGTCCGTCCT GGCCATCGAG GCCCGGCAGG CCGCGCAGCG CGCCCTCGAA
CCCGAACGGC GCCGGACCTT CCTCGTCAGC CTGCTGGGCG CACTGCTGCT CCTGGTGGTC
GGCAACTGGG CCGGCGAGCG CCTGCTCGTG CGCATCGCGC CGGCCAAACT GCCCGCGGGC
CGGCTGCGGC GCTCCCTGCT GGCCTCGGCC TCCGTGCTGG CGAACGTGAT CTTCACCGGC
ACCGCCGCGC AATGGCTGCT GAGCGGGCTC GACGCGGGCG ACAACCTCGG CGAGCGGCTC
GACGGGCTCG GGCACACCGC CGTGGGCCTC GCGGTCTTCG CGGCCTTCGT GATCGGCCTG
GGGCACGCCC TGCTCTCGCG CAAGCGCAGC TCCTGGCGCC TGCCCTCGCT GCCCGACGAC
CTTGCCCGGC GGTTGAGCCC CTACCCCTGG TGGATCGCGA TCATCGCGGC GCTCGGCGGC
ATGGTGACGG AGATCAACGC CGCCGTGGGC GCCAGCCTCG CCGCGGAAAT CACCGCCCAG
GCCTGCTTCG CGCTGCTGGT GGCCGCGGTC GTCGCCGCGT CGGTGCGGCA GCTCAACGCG
CCGCTGCCCG TGCCGGCGCA GGAGCCGGCC GCCGGCGAAG ACGCCGCGCC CGCTCCGGCC
GCCCCGCCGG CGCGCCCTCT CTGGGTCGGC CTGCTGGTCG CCTGCGCGGG CATCGCCTCC
CTCGCGGTGC TGCTGCTGGT CGCCTTCGGC TACATCGCGC TGGCCGGGGC ACTGGCGCGG
CAGATGGTCT GGAGCGGTGT CGCCTTCGCC ACCGCGTACC TGCTCTACCA ACTGGTGGAC
GACCTCTGCG ACGCCATGCT CTCCTCGCGC AGCGGCTTCG GGCGGCGCCT GCACACGGGC
ATGGGCATCG ACCCGGGCCT GCTCGACCAG GCGGCGGTCG TGTTGTCCGG CGCCCTGCGC
GTCGTGCTGT TCTTCTACCT GGTCATCGCC CTGCTGGCCC CCTTCGGCAC CGGCCCGGAC
GAGCTGTTCC GCCGTGGCAG CGCGATGGAC CAGGGCCTGA ACCTCGGCAA CTTCGCGCTG
GCCCCGCAGG CCCTGCTGAC GGCCCTGGGC GTCGTCGTGG CGGGCTTCAT CGGCATCCGC
GTGATCAAGC GCTGGCTCAG CGACCGGTAT TTTCCCAGCA CCACGCTGGA GCCGGGCATG
CGCAGCTCCA TCACCACCCT GCTGGGCTAC TTCGGCGGCG TGATGGTGAT CGCAGCCGCG
CTGGCGGCGC TGGGCATCAG CGTGGAGCGC ATCGCCTGGG TCGCGAGCGC GCTGTCGGTG
GGTATCGGCT TCGGGCTGCA GGCCATCGTG CAGAACTTCA TCTCGGGCCT GATCCTGCTG
GCAGAACGGC CCGTGAAGGT GGGAGACTGG GTCAAGCTCG GCGACACCGA AGGCGACATC
CGCCGCATCA ACGTGCGCGC CACCGAGATC CAGCTGGGCG ACCACTCCAC CGTGATCGTG
CCCAACTCGG AGTTCATCAC CAAGACCGTG CGCAACATGA CCTGGGGCGG CTCGCAGGGC
CGCGTGCTGC TGCGCCTGCC GGCCCCGCTG GACACCGACG CCCAGCGCAT GCGCGCCCTG
ATCCTGGATG CCTTCAAGGC GCACGAAAGC ATCCTGGAGA GCCCAGGGCC CAGCGTCACC
CTGGAAGACA TCGTGAGCGG CACCCTCACC TTCCTGGCCA TCGGCTACGT GAGCAACCCG
CGCAACGCCG GCGGCGTGAA AAGCGACCTG CTTTTTTCCA TCCTCGAATC GCTGCGCGCC
GCAGGCCTGG CGCTCTCGCC CCCGGCCACC ACCGCCGTGG CGCCGCTGTC CGCCACAGCC
GCCCTCCCGC CCAGGGAGCC GGCCGGCACG CCGACGCCGG GCACGGCGTA A
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| Protein sequence | MDATIHSLSL LRFLRRLPRT ALAMILLAAC LLAWPPGMVQ AAPQVPASAP ASASSAAASR
AAAAAAAGNI VDPDTPLPSV DELRKRLEAI PRKLGDQDDG RKLVNEAYAV GATAEQVVAR
RTADLADLDS RLAGLGPAPE KGAPADSPDV VQQRSALAKQ RATVDADLKL ARLIAVDAEQ
LGADLLRQRR QQFQAELTAR ADSPLGAAFW RNLRAAWPTD TERLSVLAIE ARQAAQRALE
PERRRTFLVS LLGALLLLVV GNWAGERLLV RIAPAKLPAG RLRRSLLASA SVLANVIFTG
TAAQWLLSGL DAGDNLGERL DGLGHTAVGL AVFAAFVIGL GHALLSRKRS SWRLPSLPDD
LARRLSPYPW WIAIIAALGG MVTEINAAVG ASLAAEITAQ ACFALLVAAV VAASVRQLNA
PLPVPAQEPA AGEDAAPAPA APPARPLWVG LLVACAGIAS LAVLLLVAFG YIALAGALAR
QMVWSGVAFA TAYLLYQLVD DLCDAMLSSR SGFGRRLHTG MGIDPGLLDQ AAVVLSGALR
VVLFFYLVIA LLAPFGTGPD ELFRRGSAMD QGLNLGNFAL APQALLTALG VVVAGFIGIR
VIKRWLSDRY FPSTTLEPGM RSSITTLLGY FGGVMVIAAA LAALGISVER IAWVASALSV
GIGFGLQAIV QNFISGLILL AERPVKVGDW VKLGDTEGDI RRINVRATEI QLGDHSTVIV
PNSEFITKTV RNMTWGGSQG RVLLRLPAPL DTDAQRMRAL ILDAFKAHES ILESPGPSVT
LEDIVSGTLT FLAIGYVSNP RNAGGVKSDL LFSILESLRA AGLALSPPAT TAVAPLSATA
ALPPREPAGT PTPGTA
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