Gene Aave_3586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3586 
Symbol 
ID4667608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3957678 
End bp3958244 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content67% 
IMG OID639824777 
Producttranscription elongation factor GreB 
Protein accessionYP_971911 
Protein GI120612233 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID[TIGR01461] transcription elongation factor GreB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000687664 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00676969 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCAAGG CCTTCACCAA GGAAACGGAC AACCCCCCCG ACGACGATGC GGAGTTCCCA 
TCCGCGCCCC TTCCGGCGGG CAGCAAGAAC TACATCACGC CGGCAGGGTA TGCGCGGCTG
CGGTCGGAAC TGCTCGACCT CATGGACAAC GAGCGGCCCA AGGTGGTCGA GGTCGTCCAT
TGGGCCGCGA GCAACGGTGA CCGTTCCGAG AATGGCGACT ACCTCTATGG CAAGAAGCGC
CTGCGCGAGA TCGACCGGCG CATCCGTTTC CTGACCAAGC GCCTGGACAT CGCCGAGGTG
GTCGATCCTT CCCTGCACCA CGGCAGCGAC CAGGTGTTCT TCGGCGCTAC GGTCACCTAC
GTGGACGACC TGGACGTGGA GCGGACGGTG ACCATCCTGG GAATCGACGA GGTGGACAGC
GGCCAGTCCC AGGTGAGCTG GGTGTCGCCG GTGGCCCGCG CCCTGCTGAA AGCGCGCGAG
GGCGACGAGG TCAGGCTGGG TACGCCCGGC GGACTGCGCA CGCTGGAGAT CCTGCGGGTG
GAGTACCCGG CGCGAGCGCC TTCCTGA
 
Protein sequence
MSKAFTKETD NPPDDDAEFP SAPLPAGSKN YITPAGYARL RSELLDLMDN ERPKVVEVVH 
WAASNGDRSE NGDYLYGKKR LREIDRRIRF LTKRLDIAEV VDPSLHHGSD QVFFGATVTY
VDDLDVERTV TILGIDEVDS GQSQVSWVSP VARALLKARE GDEVRLGTPG GLRTLEILRV
EYPARAPS