Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3586 |
Symbol | |
ID | 4667608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 3957678 |
End bp | 3958244 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639824777 |
Product | transcription elongation factor GreB |
Protein accession | YP_971911 |
Protein GI | 120612233 |
COG category | [K] Transcription |
COG ID | [COG0782] Transcription elongation factor |
TIGRFAM ID | [TIGR01461] transcription elongation factor GreB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000687664 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00676969 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGCAAGG CCTTCACCAA GGAAACGGAC AACCCCCCCG ACGACGATGC GGAGTTCCCA TCCGCGCCCC TTCCGGCGGG CAGCAAGAAC TACATCACGC CGGCAGGGTA TGCGCGGCTG CGGTCGGAAC TGCTCGACCT CATGGACAAC GAGCGGCCCA AGGTGGTCGA GGTCGTCCAT TGGGCCGCGA GCAACGGTGA CCGTTCCGAG AATGGCGACT ACCTCTATGG CAAGAAGCGC CTGCGCGAGA TCGACCGGCG CATCCGTTTC CTGACCAAGC GCCTGGACAT CGCCGAGGTG GTCGATCCTT CCCTGCACCA CGGCAGCGAC CAGGTGTTCT TCGGCGCTAC GGTCACCTAC GTGGACGACC TGGACGTGGA GCGGACGGTG ACCATCCTGG GAATCGACGA GGTGGACAGC GGCCAGTCCC AGGTGAGCTG GGTGTCGCCG GTGGCCCGCG CCCTGCTGAA AGCGCGCGAG GGCGACGAGG TCAGGCTGGG TACGCCCGGC GGACTGCGCA CGCTGGAGAT CCTGCGGGTG GAGTACCCGG CGCGAGCGCC TTCCTGA
|
Protein sequence | MSKAFTKETD NPPDDDAEFP SAPLPAGSKN YITPAGYARL RSELLDLMDN ERPKVVEVVH WAASNGDRSE NGDYLYGKKR LREIDRRIRF LTKRLDIAEV VDPSLHHGSD QVFFGATVTY VDDLDVERTV TILGIDEVDS GQSQVSWVSP VARALLKARE GDEVRLGTPG GLRTLEILRV EYPARAPS
|
| |