Gene Aave_3556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3556 
Symbol 
ID4669305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3929753 
End bp3930298 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content72% 
IMG OID639824747 
Producthypothetical protein 
Protein accessionYP_971881 
Protein GI120612203 
COG category[S] Function unknown 
COG ID[COG5488] Integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.217786 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.844306 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGG CGGAGGTGAG GGCCCGGCCT GCCGGCGCCG CACCCCTGCC GGTCCGGCAC 
TGGAGGCTCG CCCGCAGTCC TTCGCTCACA CCCGCGCAAT ACGGCGCCGT GTTCCTGGGC
ACGGCCGGCC TGATGCTGTG CTTCGCCGCT GCCTTCGGCG CGGCGGGCTA CTGGCCGATC
GCCGTCTTCT ATTTGCTGCT GGTCGCCGGG CTGGCCGGTG CCTGCTGGAG CGGAGCCCGG
CATGCCCTGG ACGGCGACCT CATCGTCCTG CTCGACAACG GAGAATTGGA GATTTGCTGT
CTCCGCGGCG CACAGGAGCA GCATTACCGG TTCCCGGCCG CCTGGTGCCG TGTCGAGTGC
GTGCCTGGCC GCCACCGCGC GGAACGTTCC GGGTTGTGCA TCGCATGCGG CCGCCACCGC
ATCGCCCTGG GCGCATGGGG ATCTCCTCGT CGCGCCGACC GACTGGCGGG GGAGATCCGG
GCTGCAGCGG CCACGCTGGC CCACGAGGTC CATGCACGGG AGCTTTCGGC GCCGCTCAGG
CCATGA
 
Protein sequence
MAEAEVRARP AGAAPLPVRH WRLARSPSLT PAQYGAVFLG TAGLMLCFAA AFGAAGYWPI 
AVFYLLLVAG LAGACWSGAR HALDGDLIVL LDNGELEICC LRGAQEQHYR FPAAWCRVEC
VPGRHRAERS GLCIACGRHR IALGAWGSPR RADRLAGEIR AAAATLAHEV HARELSAPLR
P