| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3481 |
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| Symbol | |
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| ID | 4665431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3841274 |
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| End bp | 3846034 |
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| Gene Length | 4761 bp |
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| Protein Length | 1586 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639824675 |
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| Product | YD repeat-containing protein |
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| Protein accession | YP_971810 |
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| Protein GI | 120612132 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01643] YD repeat (two copies) |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.130925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.269624 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACGT TCGTCAACGA CCGCAGAGCG ATCCACGAAG GCCGCAGCCC GGCGATGATC
CCGGGCCCGG TGAACCCCGT GTTCCCCAAG CCCAACGGGC CGCCCGTGCC GATCATGAAC
ATGGCGCACG GGCCGGGCCT CAAGAACGGC ACCGCCACCC TGAAGATCGA CCGCCAGCCC
GTGGCCATCG CCGGCAGCCG CTTCGAATCC ATCCCCGCCA CGCCCGACCG CCTGGGCGGC
ATCGCGGGCG TCAGGTCCAC CGTGGTGGGC GGCGCCGCCG AGCCCACCAG CTACAGCAGT
GACACCAAGT TCGAGAGCCG CGGCAGCGTG CGCTCGTTCG ACACCACCAA GAGCAATGCG
CTGGTGATCC AGCCCGGCTG GGCCATGCGG CTGGCCATGA AGGCGCTGCC CGGCCCCTAC
GACAAGCTCG CCCGGAAGGT CATCGAGAAG CTGCCCGGCG CTTTCGGCGA CCAGCTCGCG
GCCCTGGGCG AGAGCCTCAC GGACCCGAGC GTGCTCATCG GTCCTGCGCT CAAGCTGGTG
GGCAAGCTCA TCCCGGGGGT GAACCTCGTG GTGGGCGGCG CGGCCATGGC CGAATCCGCC
GTCCAGGTGG CGGAACTGGC CAAGGAAGTG CAGGAGCTGC TGACCCCGCC GCTCACCGAC
GAGAAGATCG ACCAGATCGC CGACGTCATC GCCAACGGCG TCGCCTCGGT CACCATCGGC
TTCGTGCTGG GCAAGATCGT CAAGCGGGCC AAGGGCAAAC CCAAGCCCGT GGCGAACCGG
GGCGACAACC AGGTCAACCC CAACGCCCCG GGCACCATCA TGGACGACGC GCGGCCAGGC
CACATGCCGC AGCCGTCCTG CGAGCTCGGC ACCTGCCACC CCGTCATCTT CGCCACCGGC
GCCAAGATCC TCGCCGACAC CGACTTCGAG CTGCCCGGCC CGCTGCCGCT CGCCTGGCGC
CGTTTCTACC GCTCCAGCGA CCGGCGCCCG GGCTGGCTCG GCTGGGGCTG GAGCACGCCG
CTGTCCATCG AACTGGCGCT GACCTACGAC GCCGTGCATT ACTACGACGC GCGCGGCCGC
CTCGTGCGGC TGCCGGTGCT GCCGCGCGGC GCCAGCCACT TCGATGCGCG CGAGAAGATC
ACCGTGCGGC ACCACGAGGG CGGCGGCTGG AGCATCGAAT CCACCGACGG CCTGCGCCAT
GAGTTCCCGG CCCCCGTGCC CGGCCAGTGG CGCCTGCCGC TGGCGCGCAT GGCCGACCGC
AACGGCAACG CCGTCACGCT GCATTACCCC GCGTACGACG CCACCGGCGC CGACGGCTGC
GCGCCACGGC CCCTGGGCCT GACGGACAGC GCGGGCCGGC AACTGCGCTT CGCATGGAGC
GGCGAAGAGG GCGCGCCGGA CCGGCTGCTG CAGGCCATCC ACCTGGAGCC GCGCGTACTG
GATGGCGTGC AGCACGCGGG TGGGGTGCTC GCGCGCTACG CCTACGGCAC CGAGGGCAAC
GAGGCTGGCG ACCTGCGCGC CAACCTCGCC GAGGCGGCGG ACGCCCTGGG CGGCACCGCG
CGCTACCGCT ACCGCCACCA CCTGATGGTG GCCTATGCCA CCCGCAACGG CTTCACGCAC
CACCAGCAAT GGAGCCGCCA CGATGCGGGC GGCCGGGTCG TTCGCACCTG GACGGACACG
CAGGGCCTGC TGGACACGCG CTTCGAGTAC GACCTCGGCC GGCGCACCAC CCACGTGACC
GACGCGCTGG GCCGGCGCAG CAGCTATGAA TACAACGCGG CGCACGAAGT CGTCGCCATC
ACCGAACCCG GCCCCGACGG CCGCCCCGTG CGCACCGAGA CGCGCCTGGA CGCCGCCGGC
AACCCCGAGG AAGCCCGCGA CGCGCTCGGC CGGACCACGC GCTGGCGCTT CGATGCGCGC
GGCAACCTGC TGGCCGTGAC CGACGCAGCC GGCGCCACCA CGCGCCTCGC CTACGGCCAC
CTCGACCTGC CGGTGGAGAT CACCGATGCG CTGGGCCATG TCTGGCGCCA GCACTACGAC
GAACGCGGCA ACCTCGCCGA GCGCGTCGAT CCGCTGGGCC ATGCCACGCG CTGGCGCTAC
GACGCGCGCG GCCTGCCCGT GGCCATCGAG GACGCGCACG GCAAGACCCG CCGCCTGCTG
TGGGACGACG CCGGCCAGCT CGTCGCCTAC ACCGACTGCT CCGGCCAGAC CACGCGCTAC
ACCTGGGACA CGCTCGGCAA CCTGCTGACC TCCACCGACG CCCTGGGCCA GACCACCCGG
TACCGCCACG ACGCCCTGGG CCGCCTGCGC CACGTGGTGG GGCCCGACGG CTCGGAGCAC
CGCTACGACT TCGATGCGCA GGGCAACCTG ACCGCCTACA CCGACCCGCA GGGCGCCGCC
ACGCGCTACG CCTACAACGG GCTGGACCAG CCCGTGCTGC GCCAGGACGC GCTCGGCGGC
ACGCTGCGCT ACCAGCACGA CGCCGTGGGC CGCATCGTGG CGCTGCAGAA CGAGAACGGG
GACATCACCC GCTTCACTTA CGACGCGGCG GACAACCTCA TCGAGGAAAT CGGCTTCGAC
GGCCGCATCC AGCGCTACCG CTACAACGCC GCGGGCGAAC TGGCCGAGCT GCACGAGCGC
GACGCGCGGC TGCCCCCGGA CACGCCGTAC GACCCCGACC CCGCGGCGCC GTTACCGAAG
CGCACCGTGT TCCGCCGCGA TGCGGTGGGA CGCCTCGTCG CCAAGGCACA CCTGGGGCCG
GACGGCATGG AAGAGGGCGC CGGCAGCGGC CTCACTACCT TCGCCTACGA CCTGCTGGGC
CGCATGCTGC ACGCCGGCAA TGGCGATGCC CGCGTACACT TCACCTACGA CCCGCTCTCG
CGCCTGACCG AAGAGGTGCA GGAGCATCTG GCGCCGGAAG GGGCGGGCAC CCTGGGCCGC
TATGCCTGGC ACCATGCCTA CGACGCGCTG GGCAACCGCA CGGACAGCCG CATGCCCGGC
GGCCGGCACG TGCAATGGCT CTACTACGGC TCGGGCCACC TGCACCAGAT CCGGGTGGAC
GGGCACGTGC TCTCGGACAT CGAGCGCGAC GCGCTGCACC AGGAGATCGA GCGCACGCAG
GGTGCGCTGG AGAGCCGCTA CGGCTGGGAT CCGATGGGCC GGCTGGTGGC GCACAAGGTG
GGCCGGCGGC AGGCGCTGCA GGGCCAGCCG GGCATGCCGT CGCCACAGGC CCTGCGGGAC
CGGGACCAGG GCCTGCCCGC ATTGCCGCAG CTTCCTTCGG GCGACCGCAT CGCGCGGCAG
TACCGCTACG ACCCGACGGG CCACCTGATC GCCACGCGCG ACGGCCTGCG GGGCGAGAGC
CACTACCGCT ACGACCCGCT GGGCCGCATC CTGGCGGCGC AGCGCGGGGA AGGCAAACAA
CAGCCCACCG AGCGCGAGAC CTTCGCCTTC GACCCGGCCG GCAACCTGCT GAACCCGAAC
CGGGGCGGCG CGCAATCCAG CGGCGGCGTG GGCCAGCGGG ACGTGGTGCC GCACAACCGC
CTGGCGGTGT ACCAGGACCT GCGCTTCACC TACGACCTGC ACGGCAACAC CATCGAGCGC
CGCATCGGCT GGCACACGGT GCAGCACTAC CGCTACAGCC CGGAGCACCA GATCGTGGAG
GCGCGCGTCG TGCGGTATCG CGAACGGCCC GCCGAAGGCC ACGCGGAACC GGCGCCTGCG
ACCACGGAGC AGGTCACCCA CTACCGCTAC GACGCCCTGG GCCGGCGCAT CGACAAGCGG
GACGCGTTCG GGCGCACGGC GTTTCTCTAC GACGGGGACC TGCTGGCGGG CGAGCTGCGG
GGCAGCAAGT TGTCGGAATA CCTTTACGAG CCGGACAGCT TCGTGCCGCT GGCGAAGCTG
GAGTCGGAGT GGAAGGGTGA GGCCGCAAAA GAAAGGGATG AGGACAAGGA GTCGGCACGA
CCCAAGGACT TCGCTGCCTA CTACTACCAA TGCGACCAGA TCGGCGCGCC GCAGGAGCTG
ACGGACGAGC AGGGCCGCAT CGTGTGGGCG GCGAGCTACC AGGTGTGGGG GCAGACGCGG
GCGCTGCAGG TCATGCGCAC GGGCACGGAC GACGCGGCGG TGTTCACCCA GGCGGAGCGG
CCTTTGGCGC TGGCGGCGAA GGGGGATGTG CAGGCGCTGA ACTTCGTGGA GCAGCCGCTG
CGGTTCCAGG GGCAGTACTT CGATGGGGAG ACGGGGCTGC ACTACAACCG GTTTCGGTAC
TACGATCCGG TGACGGGGCG GTTCGTGCAT CAGGATCCGA TTGGGTTGGC CGGCGGTAAT
AATCTATTTT TTTACGCCCC AAATCCTTTA ATTTGGAACG ATCCGCTCGG TTTGAAGCCA
AAGCGATGCG GTTGCCGTCC TGATCCGTGC GGTATTGCGA AACATGGACA TCAACCCTCT
CCTCGACCAA GTGATACGGA ATCGCACCAT ATTATTCAAG ATGCCTGGGC CAAAAGCCAA
ATTGGTAAAC AAGGTGGGTA TAGTACTTAC GGTGCACCTG CCATTTTGCT ACAAAATGGC
CCCCATGATA TTGCAAATGC GGCGCAGAAT GCAAGAAGGG ATGCGCGGTT AGCTACAGGT
AGGGGCAAGT GGGAGTCGCC GCTTCGAGAT GAGTTCGACA ATGCGTCGAG AGATTTGAGG
GCTGCAGGCG TTTCAGAGAG ATGCAGAAAA CGGGCCCTTA AAAAGGCTTA TCAATATTTC
TATAACCGTA CAGATGAATA A
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| Protein sequence | MATFVNDRRA IHEGRSPAMI PGPVNPVFPK PNGPPVPIMN MAHGPGLKNG TATLKIDRQP
VAIAGSRFES IPATPDRLGG IAGVRSTVVG GAAEPTSYSS DTKFESRGSV RSFDTTKSNA
LVIQPGWAMR LAMKALPGPY DKLARKVIEK LPGAFGDQLA ALGESLTDPS VLIGPALKLV
GKLIPGVNLV VGGAAMAESA VQVAELAKEV QELLTPPLTD EKIDQIADVI ANGVASVTIG
FVLGKIVKRA KGKPKPVANR GDNQVNPNAP GTIMDDARPG HMPQPSCELG TCHPVIFATG
AKILADTDFE LPGPLPLAWR RFYRSSDRRP GWLGWGWSTP LSIELALTYD AVHYYDARGR
LVRLPVLPRG ASHFDAREKI TVRHHEGGGW SIESTDGLRH EFPAPVPGQW RLPLARMADR
NGNAVTLHYP AYDATGADGC APRPLGLTDS AGRQLRFAWS GEEGAPDRLL QAIHLEPRVL
DGVQHAGGVL ARYAYGTEGN EAGDLRANLA EAADALGGTA RYRYRHHLMV AYATRNGFTH
HQQWSRHDAG GRVVRTWTDT QGLLDTRFEY DLGRRTTHVT DALGRRSSYE YNAAHEVVAI
TEPGPDGRPV RTETRLDAAG NPEEARDALG RTTRWRFDAR GNLLAVTDAA GATTRLAYGH
LDLPVEITDA LGHVWRQHYD ERGNLAERVD PLGHATRWRY DARGLPVAIE DAHGKTRRLL
WDDAGQLVAY TDCSGQTTRY TWDTLGNLLT STDALGQTTR YRHDALGRLR HVVGPDGSEH
RYDFDAQGNL TAYTDPQGAA TRYAYNGLDQ PVLRQDALGG TLRYQHDAVG RIVALQNENG
DITRFTYDAA DNLIEEIGFD GRIQRYRYNA AGELAELHER DARLPPDTPY DPDPAAPLPK
RTVFRRDAVG RLVAKAHLGP DGMEEGAGSG LTTFAYDLLG RMLHAGNGDA RVHFTYDPLS
RLTEEVQEHL APEGAGTLGR YAWHHAYDAL GNRTDSRMPG GRHVQWLYYG SGHLHQIRVD
GHVLSDIERD ALHQEIERTQ GALESRYGWD PMGRLVAHKV GRRQALQGQP GMPSPQALRD
RDQGLPALPQ LPSGDRIARQ YRYDPTGHLI ATRDGLRGES HYRYDPLGRI LAAQRGEGKQ
QPTERETFAF DPAGNLLNPN RGGAQSSGGV GQRDVVPHNR LAVYQDLRFT YDLHGNTIER
RIGWHTVQHY RYSPEHQIVE ARVVRYRERP AEGHAEPAPA TTEQVTHYRY DALGRRIDKR
DAFGRTAFLY DGDLLAGELR GSKLSEYLYE PDSFVPLAKL ESEWKGEAAK ERDEDKESAR
PKDFAAYYYQ CDQIGAPQEL TDEQGRIVWA ASYQVWGQTR ALQVMRTGTD DAAVFTQAER
PLALAAKGDV QALNFVEQPL RFQGQYFDGE TGLHYNRFRY YDPVTGRFVH QDPIGLAGGN
NLFFYAPNPL IWNDPLGLKP KRCGCRPDPC GIAKHGHQPS PRPSDTESHH IIQDAWAKSQ
IGKQGGYSTY GAPAILLQNG PHDIANAAQN ARRDARLATG RGKWESPLRD EFDNASRDLR
AAGVSERCRK RALKKAYQYF YNRTDE
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