Gene Aave_3275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3275 
Symbol 
ID4667592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3619700 
End bp3620875 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content73% 
IMG OID639824473 
Producthistidine kinase 
Protein accessionYP_971609 
Protein GI120611931 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.443342 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCTTCG CGGTGTGGGG CGACGACGGG CGCTTCGTGG GCGGCGACGA GAACCTTCCC 
GCGAGCCGCC TGCCCGGCGG CACCAGCGGA GGCATCCGCG GTGGAGACCA CCGCTACGGC
TTCTCCGACA TCGTGCTGGA CGGCCGCGAA CTGCGGCGCG CCACGCTGCA CGTCGCAGGC
CCGCCGGCCT ATACCGTGGT GATGGCCCAG ACCACGTCGC AGCGCACCCA ATTGCTGGGC
CGGCTGCTGC TGTTCTCGGT GCTGGCGCAG CTGTGGCTGC TCGTGGCGCT GGGTTCGTGG
CTGCTGCGCG GCATCGAGCG CGACCTGCGG CCGCTGGCCG ATCTGCAGGA CGCCATGGCA
CAGCGCGATG CGGCCGACCT GCGCCCCCTG CCGGGCACAC TGACCGCGCA GGCGCGCACC
AGTGACGTAC AGCGCCTGGG GGAGGCCCTG GACGGCCTGC TGGCGCGCGC GCGCCTGGGC
CTGCAGGCGC AGCGCGAATT CGCCGGCAAC GTGGCCCACG AACTGCGCAC GCCACTGGCC
GGCATCCGGG CGCAGGCCGC CAACGCACTG GCCCAGGACG ACCCCGCCGT CTGGCGCAGC
GAACTGCAGG GCATCGCCGA CGCCGAACAG CGCGCCAGCC GCACCGTGAA CCAGTTGCTC
GCGCTGGCAC GCGCCGCCGA AGGCGAGATC GCCCTGCCCC TGCAGACCGT GGCGCTGCAA
GCCCTGGTGC GCAAGGTGCT GCTGCGCTAC CTGCCGCGCG CCGACGAACT CGGCGTGGAC
CTGGGCGCCG AGGGCCTGGA CCAGCCCGTG GCCGTGCGCG GCGAGGCCGG GCTGATCGAA
GGCATCCTGA ACAACCTGCT GGACAACGCC CTGCGCTACG GCCGCGGCCA GCCGCCGCGC
ATCACCGTCA CGCTGGAACA TTCGCCCCCC TGGGCCGTGC TGCGCGTGGC CGACAACGGC
CCGGGCATGG ATGCCGGCCT CGGCCTGCAC CATCCCCGGC GCTGGACGCA GGGCGAGCAA
GGCCAGCGCC TCGGCCAGGG CGCCGGGCTG GGCCTCGCGA TCGTGGCGCG CTATGCCGAA
CTGATGAAAG GCCGCGTGCA GATGCAACCG ACACCCGGCG GAGGCCTGAC CGCCTGCATC
CACCTGCCCA TCGAAGCGCG CGAAGAAGCG AAGTGA
 
Protein sequence
MRFAVWGDDG RFVGGDENLP ASRLPGGTSG GIRGGDHRYG FSDIVLDGRE LRRATLHVAG 
PPAYTVVMAQ TTSQRTQLLG RLLLFSVLAQ LWLLVALGSW LLRGIERDLR PLADLQDAMA
QRDAADLRPL PGTLTAQART SDVQRLGEAL DGLLARARLG LQAQREFAGN VAHELRTPLA
GIRAQAANAL AQDDPAVWRS ELQGIADAEQ RASRTVNQLL ALARAAEGEI ALPLQTVALQ
ALVRKVLLRY LPRADELGVD LGAEGLDQPV AVRGEAGLIE GILNNLLDNA LRYGRGQPPR
ITVTLEHSPP WAVLRVADNG PGMDAGLGLH HPRRWTQGEQ GQRLGQGAGL GLAIVARYAE
LMKGRVQMQP TPGGGLTACI HLPIEAREEA K