| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3257 |
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| Symbol | |
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| ID | 4667724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3600450 |
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| End bp | 3602831 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639824456 |
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| Product | lysine decarboxylase |
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| Protein accession | YP_971593 |
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| Protein GI | 120611915 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.975829 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCC GCTTTCCCAT CGTCATCATC GACGAGGACT ACCGTTCCGA GAATACATCG
GGCCTGGGTA TCCGGGCCCT GGCCCAGGCG ATCGAGGCCG AGGGTTTCGA GGTGCTCGGC
GTGACGAGCT ACGGCGACCT GTCGCAGTTC GCGCAGCAGC AGAGCCGGGC GAGCGCCTTC
ATCCTGTCGA TCGACGACGA GGAGTTCACG CTGGGCTCGG GGCTGGACCC GATCGTGCTG
AGCCTGCGCA ACTTCATCGC CCAGGTGCGC CGCAAGAATT CCGACGTGCC GATCTACGTG
CACGGCGAGA CCAAGACCGC GCGCCACCTG CCCAACGACA TCCTGCGCGA GCTGCACGGC
TTCATCCACA TGTTCGAGGA CACGCCGGAG TTCGTGGCCA AGCACATCAT CCGCGAGGCC
AAGAGCTACC TGGAGAGCGT GCAGCCGCCG TTCTTCAAGG CGCTGCTGGA CTATGCGGAA
GACGGCTCCT ACTCGTGGCA CTGCCCGGGC CACTCCGGCG GCGTGGCGTT CCTCAAGAGC
CCCGTGGGCC AGATGTTCCA CCAGTTCTTC GGCGAGAACA TGCTGCGCGC GGACGTGTGC
AACGCCGTGG AGGAGCTGGG CCAGCTGCTG GACCACAACG GGGCCATCGG CGAGAGCGAG
CGCAACGCGG CGCGCATCTT CAATGCCGAC CACTGCTTCT TCGTGACCAA CGGCACGAGC
ACCTCGAACA AGATGGTGTG GCACCACACG GTGGCGCCGG GCGACGTGGT GGTGGTGGAC
CGCAATTGCC ACAAGTCCAT CCTGCACTCG ATCATCATGA CCGGGGCGAT CCCCGTGTTC
CTGAAGCCCA CGCGCAACCA CTTCGGCATC ATCGGCCCGA TCCCGCAGGC CGAGTTCGAG
AAGGAGGCGA TCCAGGCGAA GATCCGCGCC AACCCGCTGC TCAAGGGCGT GGACGCCACC
ACGGTGAAGC CGCGCGTGCT GACGATCACG CAGTCCACCT ACGACGGCGT GCTCTACAAC
ACCGAGACCA TCAAGTCGAT GATGGACGGC TACGTGGACA ACCTGCACTT CGACGAGGCC
TGGCTGCCGC ATGCGGCCTT CCATCCGTTC TACGGCAGCT ACCACGCCAT GGGCAAGAAG
CGCGCGCGCC CGAAGCATTC GGTGGTGTAT GCGACGCAGT CCATCCACAA GCTGCTGGCC
GGCATCAGCC AGGCGAGCCA CGTACTGGTG CAGGATTCGC AGACGGTGAA ACTGGACCGC
CCGCTCTTCA ACGAGGCGTA CCTGATGCAC ACCTCGACCA GCCCGCAGTA CAGCATCATC
GCCAGCTGCG ACGTGGCCGC GGCCATGATG GAGCCGCCCG GCGGCACGGC GCTCGTGGAA
GAGAGCCTGC TCGAAGCCCT GGATTTCCGC CGCGCCATGC GCAAGGTGGA AGAGGAGTTC
GGCAAGGACG ACTGGTGGTT CAAGGTCTGG GGCCCGGAGA AGATGGCCGA CGAGGGCGTG
GGCCGCGCGG AGGACTGGAT CATCCGCAGC GACGGCAAGG GCAAAAAGAA CGGCAGCAAG
TGGCACGGCT TCGGCCAGCT GGCCGACGGC TTCAACATGC TGGACCCGAT CAAGTCCACC
ATCGTCACGC CCGGCCTGAA CCTGGACGGC AAGTTCGACA AGACCGGCAT TCCCGCGTCC
ATCGTGACCA AGTACCTGGC CGAGCACGGC GTGGTGGTGG AGAAGACGGG GCTCTACAGC
TTCTTCATCA TGTTCACCAT CGGCATCACC AAGGGCCGCT GGAACACGCT GCTGGCCGCG
CTGCAGCAGT TCAAGGACGA CTACGAGAAG AACCAGCCGA TGTGGCGGAT CCTTCCGGAG
TTCTGCCAGC AGCACAAGCG CTACGAGCGC ATGGGCCTGA AGGACCTGTG CCAGCACGTG
CATGCGCTCT ACGCCAAGTA CGACATCGCG CGGCTGACGA CCGAGATGTA CCTGTCGGAC
CTGACGCCGG CGATGAAGCC CAGCGACGCC TATGCCCACA TCGCGCACCG CAAGACCGAG
CGCGTGGAGA TCGACCACCT GGAAGGCCGC ATCACCACCA GCCTGATCAC GCCGTACCCG
CCGGGGATTC CGCTGCTGAT CCCGGGCGAG GTCTTCAACA AGAAGATCGT GGACTACCTC
AAATTCGCGC GCGAGTTCGC CAAGCTCTGT CCGGGCTTCG AGACCGACAT CCACGGCCTG
GTGGAGATCG AGGACGACAA CGGCCACGTG CGCTACTACG CCGATTGCGT GACCCGGACC
GAGCAGCCCA AGCCCGGCCG CCGCGGCGGC CGCAAGGACG CGCCCGACGC CGAGGACATC
GTGCAGGTGG GCAGCGACGG GCCGTTCGGC CGGAAGATCT GA
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| Protein sequence | MKFRFPIVII DEDYRSENTS GLGIRALAQA IEAEGFEVLG VTSYGDLSQF AQQQSRASAF
ILSIDDEEFT LGSGLDPIVL SLRNFIAQVR RKNSDVPIYV HGETKTARHL PNDILRELHG
FIHMFEDTPE FVAKHIIREA KSYLESVQPP FFKALLDYAE DGSYSWHCPG HSGGVAFLKS
PVGQMFHQFF GENMLRADVC NAVEELGQLL DHNGAIGESE RNAARIFNAD HCFFVTNGTS
TSNKMVWHHT VAPGDVVVVD RNCHKSILHS IIMTGAIPVF LKPTRNHFGI IGPIPQAEFE
KEAIQAKIRA NPLLKGVDAT TVKPRVLTIT QSTYDGVLYN TETIKSMMDG YVDNLHFDEA
WLPHAAFHPF YGSYHAMGKK RARPKHSVVY ATQSIHKLLA GISQASHVLV QDSQTVKLDR
PLFNEAYLMH TSTSPQYSII ASCDVAAAMM EPPGGTALVE ESLLEALDFR RAMRKVEEEF
GKDDWWFKVW GPEKMADEGV GRAEDWIIRS DGKGKKNGSK WHGFGQLADG FNMLDPIKST
IVTPGLNLDG KFDKTGIPAS IVTKYLAEHG VVVEKTGLYS FFIMFTIGIT KGRWNTLLAA
LQQFKDDYEK NQPMWRILPE FCQQHKRYER MGLKDLCQHV HALYAKYDIA RLTTEMYLSD
LTPAMKPSDA YAHIAHRKTE RVEIDHLEGR ITTSLITPYP PGIPLLIPGE VFNKKIVDYL
KFAREFAKLC PGFETDIHGL VEIEDDNGHV RYYADCVTRT EQPKPGRRGG RKDAPDAEDI
VQVGSDGPFG RKI
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