| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3240 |
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| Symbol | |
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| ID | 4666807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3573178 |
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| End bp | 3576750 |
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| Gene Length | 3573 bp |
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| Protein Length | 1190 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639824439 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_971576 |
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| Protein GI | 120611898 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.860175 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCGGA TTCCTACAAT ACGCCCCATG TTTGTCCATT TGCGCCTGCA CACCGAGTTT
TCCGTCGTCG ACGGCACCGC CCGCATCGAC GAAGTGGCCA AGGCGGCCTC GAAAGATGGC
CAGCCGGCCC TGGCGATCAC CGATCTCCAC AACCTTTTCG GCGCCATCAA GTTCTACAAG
GAAGCCCGCG GCAAGGGCGT CAAGCCCGTC CTGGGCGCGG AAGTCAGCAT CGAGCCGGAG
ACGGCCGGCG GCCCGCCCGG CCGCATCCTC CTGCTGGCCC AGGGCCGGCA GGGCTACCTG
AACCTTTGCG AGATGCTGGC GCGCGCCTGG ACGCGCAATG TCGTGAAGAA CGTGCCGCTG
TGCACCTGGG AATGGCTGCA AGAGCTGGGT GGCGACCTCA TCGCGCTGTC TGGCGCGCAG
GCGGGCCCGG TGGGCCAGGC CTTCACCCGC GGCGATGAAG CCGGGGCCGC ACGCGTGGCG
CTGCGGCTGG CCGGGATCTT CCCGCACCGC TTCTACCTGG AGCTGCAGCG GGCCGGGCGC
CCGGAGGACG AATCCCAGGT GGTGGCGGCC GTGCAGCTCG CGGCGCGCCT CAACCTGCCC
GTGGTGGCGA CCCAGCCCAC CCAGTTCCTT ACCGCCGACG ACTACGAGGC CCACGAGGCA
CGGGTCTGCA TCGCGGAAGG GGAAATCCTC GCGAACCCGC GCCGGGTGCG CCGCTTCACC
CGCGAGCAGT ATTTCAAATC CAGTGCGCAG ATGGAGGCGC TTTTCGCCGA TGTGCCGACG
GCCATCGCCA ACACGCTGGA GATCGCCAAG CGCTGCAGCC TGACGCTGGT GCTCGGCAAG
CCGCGCCTGC CGGACTTTCC CACGCCCAAC GGCATGCCGA TCGAGGAGTA TTTCCGCTAC
GCCTCGTTCG AAGGGCTGGA GGAGCGCCTG AAGCACCTTT TCCCCAACGA GGCCGAGCGC
GAGAAGCAGC GCCCGCGCTA TGTGGAGCGC CTGGAGTTCG AGCTGGGCAC CATCCTGAAG
ATGGGCTTCC CGGGCTACTT CCTCATCGTG GGGGACTTCA TCCAGTGGGC CAAGCAGAAC
GGCTGTCCGG TGGGGCCGGG CCGGGGCTCC GGCGCCGGCT CGCTCGTGGC CTACGCGCTC
AAGATCACCG ATCTGGACCC GCTGCAGTAC AACCTGCTGT TCGAGCGCTT CCTGAACCCC
GAGCGGGTCT CGATGCCCGA CTTCGACATC GATTTCTGCC AGTCCAACCG CGACCGGGTG
ATCGACTACG TGAAGGACAA GTACGGCAAG AACGCCGTGA GCCAGATCGC CACCTTCGGC
ACCATGGCGG CCAAGGCGGC GATCCGCGAC GTGGGCCGCG TCATGGACAT GAGCTACACC
TTCTGCGACG GCATCTCCAA GCTGGTGCCC GGCAAGCCCG GCATGTCCTA TACGCTGGCC
TATCCGCCCG AGGTGAAGAA GGAGGGCGAC AAGAACAACT ACGCGCTGGA GCTCGAGCCC
ATGCTCTACG AGCGCGTGCG CAAGGAGGAG GACGTCAAGA CCGTCATCGA GATGGCGCAG
AAGCTCGAGG GCATGACCCG CAACATCGGC ATGCACGCCG GGGGCGTGCT GATCGCGCCG
GGCAAGCTCA CCGATTTCTG CCCGCTCTAC CAGCAGCCGG GCAGCGAGTC GGCCGTGAGC
CAGTACGACA AGGACGACGT GGAGGCCATC GGCCTCGTGA AGTTCGACTT CCTGGGGCTG
GCCACGCTGA CGATCCTGGA GATCGCCCGC GAATTCATCA TGAAGCGCCA CAAGGGGCAG
GAGAACTTCG CGTTCGAGAA CATCCCGCTC GACGACGCGC CGACCTACCG GCTGTTCTCC
GAAGGCAAGA CGGAAGCCGT GTTCCAGTTC GAATCGCGCG GCATGCAGGG CATGCTGAAG
GAGGCGCGCC CGAGCCGGCT GGAGGACCTG ATCGCCCTGA ACGCGCTCTA CCGCCCGGGC
CCGATGGACC TGATCCCCAC CTTCGTGAAC CGCAAGCACG GCAAGGAGCC GGTGGAGTAC
CCGCATCCGC TGGTCGAGCC CGTGCTGGCC GAGACCTACG GGATCATGGT GTACCAGGAG
CAGGTGATGC AGACCGCCCA GGTGCTGGGC GGCTACAGCC TGGGCGGCGC CGACATGCTG
CGCCGGGCCA TGGGCAAGAA GAAGGCCGAG GAAATGGCCG AGCACCGCGA GATCTTCCGC
AAGGGCGCGG CCGAGAAGGG CATCGGCCAG GACAAGGCCG ACGAGGTCTT CGACCTGATG
GAGAAGTTCG CGGGCTACGG CTTCAACAAG TCGCACGCCG CCGCCTATTC CCTGCTGGCC
TACCATACCG GCTGGCTCAA GGTGCACTAC ACGGCCGAGT TCTTCTGCGC CAACATGACG
GTGGAAATGG ACGACACCGA CAAGCTGAAG GTGCTGTACG AAGACGCCAT GAAGATGGGG
CTGACCTTCG AGCCGCCGGA CGTCAACCGC GGCATGTACC GCTTCGAGCC GGTGACGGAC
AAGGTGATCC GCTACGGGCT GGGCGCGGTC AAGGGCACCG GCCAGCAGGC CATCGAGGCC
ATCATCGCCG CGCGCGAGGG CCGCGGCGTG GGCCCGCGCG GCGACACGAA GGGACCGTTC
GCCAGCCTGT TCGACTTCTG CGCGCGGGTG GACCGCACCC GGCTGAACAA GCGCACGCTG
GAGGCGCTCA TCAAGGCGGG CGCGTTCGAC GCCATCGAGA TGAACCGCGC CTCGCTCGTG
GCCTCGATCG ACCGGGCCTT CGACTTCGCC AACTCCCTGA TCGCCAACGC CAACCAGGGC
GGCCTGTTCG ACATGATGGG TGACGATGCG CACGGCTCCA GCACCCAGGA CCCGGCCCTG
GTGGAGATGC TGCCCTGGGG CGTGAAGGAG CGCCTCACCC AGGAGAAGAC CGCCGTGGGC
TTCTACCTGT CGGGCCACCT GTTCGACGAG GTGGAAAAGG AAGTCCGCCG CTTCGTGCGC
ACCCCGATCG AGGAGCTGGC CGACAGCCGC GAGCCGCAGA TCATGGCAGG CATCGTGAGC
GACTTCCGGG TGATCAACGG GCAGCGGGGC CGCCTGGCGC TCTTCAAGCT CGACGACAAG
TCGGCCATGA TCGAGGCCTC GGCCGACGAG AACGTGATCA ATGCCCACCG CGACCTGCTC
AAGGAGGACG AATTCGTGGT GCTGCTGGGG CGGCTGCAGC TCGACCATTT CAGCGGCGGC
CTGCGCGTCA AGGTGATGCA GGCCTGGGAT CTCGCCAGCG CGCGCGCCAA GTTCGGCCGC
TACCTGCAGG TGGCGGTGGG CGACTGCGCG CCGGACGTGC AGCGCCTGGT GCGCGAATTC
CCCCCGAAGC GCCAGGAAAC GCCCGAAGGC GAGGTGCTGG TGCACGGCCT GCGCGTGCGC
ATGGGCGTGC GCTGCCGCTC CGAGGGGCAG GAGGCCGTGG CCGAACTGCA ACTGGGCGAG
GGCAGCCGGT TCTTCCCCTC GGACGCGGCC CTGGCGGCCT GGAGCGCGGA GGCCGGCAGC
GGGGTGGTGA ACGTCGTGTA CGACGCCGGC TGA
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| Protein sequence | MGRIPTIRPM FVHLRLHTEF SVVDGTARID EVAKAASKDG QPALAITDLH NLFGAIKFYK
EARGKGVKPV LGAEVSIEPE TAGGPPGRIL LLAQGRQGYL NLCEMLARAW TRNVVKNVPL
CTWEWLQELG GDLIALSGAQ AGPVGQAFTR GDEAGAARVA LRLAGIFPHR FYLELQRAGR
PEDESQVVAA VQLAARLNLP VVATQPTQFL TADDYEAHEA RVCIAEGEIL ANPRRVRRFT
REQYFKSSAQ MEALFADVPT AIANTLEIAK RCSLTLVLGK PRLPDFPTPN GMPIEEYFRY
ASFEGLEERL KHLFPNEAER EKQRPRYVER LEFELGTILK MGFPGYFLIV GDFIQWAKQN
GCPVGPGRGS GAGSLVAYAL KITDLDPLQY NLLFERFLNP ERVSMPDFDI DFCQSNRDRV
IDYVKDKYGK NAVSQIATFG TMAAKAAIRD VGRVMDMSYT FCDGISKLVP GKPGMSYTLA
YPPEVKKEGD KNNYALELEP MLYERVRKEE DVKTVIEMAQ KLEGMTRNIG MHAGGVLIAP
GKLTDFCPLY QQPGSESAVS QYDKDDVEAI GLVKFDFLGL ATLTILEIAR EFIMKRHKGQ
ENFAFENIPL DDAPTYRLFS EGKTEAVFQF ESRGMQGMLK EARPSRLEDL IALNALYRPG
PMDLIPTFVN RKHGKEPVEY PHPLVEPVLA ETYGIMVYQE QVMQTAQVLG GYSLGGADML
RRAMGKKKAE EMAEHREIFR KGAAEKGIGQ DKADEVFDLM EKFAGYGFNK SHAAAYSLLA
YHTGWLKVHY TAEFFCANMT VEMDDTDKLK VLYEDAMKMG LTFEPPDVNR GMYRFEPVTD
KVIRYGLGAV KGTGQQAIEA IIAAREGRGV GPRGDTKGPF ASLFDFCARV DRTRLNKRTL
EALIKAGAFD AIEMNRASLV ASIDRAFDFA NSLIANANQG GLFDMMGDDA HGSSTQDPAL
VEMLPWGVKE RLTQEKTAVG FYLSGHLFDE VEKEVRRFVR TPIEELADSR EPQIMAGIVS
DFRVINGQRG RLALFKLDDK SAMIEASADE NVINAHRDLL KEDEFVVLLG RLQLDHFSGG
LRVKVMQAWD LASARAKFGR YLQVAVGDCA PDVQRLVREF PPKRQETPEG EVLVHGLRVR
MGVRCRSEGQ EAVAELQLGE GSRFFPSDAA LAAWSAEAGS GVVNVVYDAG
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