| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3151 |
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| Symbol | |
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| ID | 4667907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 3479253 |
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| End bp | 3480065 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639824352 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_971489 |
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| Protein GI | 120611811 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.11649 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGACA CCTCCGCCCC CACCTCTTCT TCACCCAGCT CCGCGGCCAT GCCCGGAGCC
CTGCCCCTGG TCGTGCTCAC CGGCGCCTCG CGCGGCATGG GCCTGGCTAT GGCCCGGCAA
CTGCTGCAGG GCGGGCATGC GCTCGTCACC CTCTCGCGCG GCACGAGCAG CGAGCTGGAA
GACGTCGCGC AGCGCACCGG CATGCCGCTG GCGCAATGGC CGCAGGACCT CGCCGACGGC
GCCCGGGCCG CCGCCCGGCT GCGCGCATGG CTGGAAGACC AGCCGTCCGG CCGATACGCC
AGCGCCACGC TCATCAACAA CGCGGGCGTG GTGCCCCGCA TCGCACCGCT GGCCGACAGC
GACCCGGCCG ATCTCGCCAA TGCGCTGCGC ATCGGGCTGG AGGCGCCCAT GCAGCTCACC
GCCGCATTCC TGGCCGCCAC GCGCGGCTGG GGCGTGCCGC GCAAGGTGCT CAACATTTCC
TCCGGCCTCG GGCGGCGGCC GATGGCCTCG CAATCGGCCT ACTGCGCGGC CAAGGCCGGC
ATGGACCATT TCACGCGCTG CCTCGCGCTG GACGAGGCGC GGCAGCCCGG CGGCGCCCGG
GTGTGCTCGC TGGCGCCCGG CGTGATCGAC ACGGACATGC AGGTCCATTT GCGCGGCGCC
GACCCCGGGG CGTTCCCCGA TGTGCAGAAC TTCGCCCAGC TGAAGGCGAC CGGCATGCTC
GCCTCGCCCG GCGAGGCCGC GGCGCGCGTG CTGGCCTGGC TCGCGCGGCC CGATTTCGGC
GACGCGCCCG TGGCCGACGT GCGCGAGGCC TGA
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| Protein sequence | MQDTSAPTSS SPSSAAMPGA LPLVVLTGAS RGMGLAMARQ LLQGGHALVT LSRGTSSELE
DVAQRTGMPL AQWPQDLADG ARAAARLRAW LEDQPSGRYA SATLINNAGV VPRIAPLADS
DPADLANALR IGLEAPMQLT AAFLAATRGW GVPRKVLNIS SGLGRRPMAS QSAYCAAKAG
MDHFTRCLAL DEARQPGGAR VCSLAPGVID TDMQVHLRGA DPGAFPDVQN FAQLKATGML
ASPGEAAARV LAWLARPDFG DAPVADVREA
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