Gene Aave_3144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3144 
Symbol 
ID4669782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3469853 
End bp3470311 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content67% 
IMG OID639824345 
ProductAsnC family transcriptional regulator 
Protein accessionYP_971482 
Protein GI120611804 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.18277 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.966672 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGTA TCGACCGGAA AATCCTCGCC GTGCTCCAGG CCGACGCGCG CGCCAGCCTG 
CAGGACATCG GCCAGGCCGT GGGCCTGAGC CCGTCGCCCT GCTGGGCGCG CATCCGCCGC
ATGGAGGAAT CCGGCGTGAT CGAGGGCTAC ACGGTGCGCC TCAACGCCCA GGCGCTGGAC
CTGGCCGATA CCGTGCTCGT GCAGGTCACG CTCGACAGCC ATTCCGACAA CACCCTGGAG
AAGTTCGGCG AAACGCTCGC GAGCATCCCC GAGGTGGTGG AGGCGCACCT GGTGTCGGGC
GACTACGACT ACCTGCTGCG CGTGGTGGTG AAGGACACGC GCGACTACGA GCGCCTGTTG
CGCGAGAAGC TCTACAAGAT CAAGGGCATC CGCCACAGCC GCTCGAGTTT CGTGCTGCGC
ACGCTCAAGA AAGCGGATCT GCCCCTGCGC GCGGACTGA
 
Protein sequence
MDRIDRKILA VLQADARASL QDIGQAVGLS PSPCWARIRR MEESGVIEGY TVRLNAQALD 
LADTVLVQVT LDSHSDNTLE KFGETLASIP EVVEAHLVSG DYDYLLRVVV KDTRDYERLL
REKLYKIKGI RHSRSSFVLR TLKKADLPLR AD