| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3138 |
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| Symbol | |
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| ID | 4668988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3463267 |
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| End bp | 3464049 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639824339 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_971476 |
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| Protein GI | 120611798 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0721208 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATACA CCATCGACTT GTCGGGCCGC GTGGCCCTGG TGACGGGCGC TTCGAGCGGC
CTGGGCGAGC AGTTCGCCCG CACCCTGGCG CGCGCGGGGG CCGGCGTGGT GCTGGCCAGC
CGGCGCATGG AAAAGCTCAA GGCCCTGCGC GCGCGCATCG AGGGGGAGGG CGGCGACGCC
CACGTGGTCG AGCTGGACGT GACCGACCAC GACTCCATCA AGGCCGCCGT GGCCCATGCG
GAGACCGAGA TGGGCTCGAT CGACATCCTC GTGAACAACT CGGGCGTCTC CACCACCCAG
CGTATCCAGG ACGTCACCCC GGACGACTTC GACTTCGTCT TCGACACCAA CGTGCGCGGC
GCCTTCTTCG TCGCGCAGGA GGTCGGCAAG CGCATGCTGG CGCGTTCGCG CGGCGCCGCG
CCGGGCAGCT TCACGGGCGG GCGCATCATC AACATCGCCT CCATGGCCGG CCTCAAGGTG
CTGCCGCAGA TCGGCGCCTT CAGCATGAGC AAGGCGGCCG TGGTGCACAT GACCCGCGCC
ATGGCGCTGG AATGGGGGCG CTTCGGCATC AACGTGAACG CGATCTGCCC GGGCTACATC
GATACGGAGA TCAACCACCA CCACTGGCAG ACCGAGCAGG GCCGCAAGCT CGTGGACCTG
CTGCCGCGCA AGCGCGTGGG CGAGCCGCGC GACCTGGACG CGCTCATCGT CATGCTGGCC
AGCGACCAGA GCCATTTCGT GAACGGGGCG GTGATCGCGG CCGACGACGG TTTCGGCGCC
TGA
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| Protein sequence | MAYTIDLSGR VALVTGASSG LGEQFARTLA RAGAGVVLAS RRMEKLKALR ARIEGEGGDA
HVVELDVTDH DSIKAAVAHA ETEMGSIDIL VNNSGVSTTQ RIQDVTPDDF DFVFDTNVRG
AFFVAQEVGK RMLARSRGAA PGSFTGGRII NIASMAGLKV LPQIGAFSMS KAAVVHMTRA
MALEWGRFGI NVNAICPGYI DTEINHHHWQ TEQGRKLVDL LPRKRVGEPR DLDALIVMLA
SDQSHFVNGA VIAADDGFGA
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