Gene Aave_3130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3130 
Symbol 
ID4668242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3453249 
End bp3454529 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content69% 
IMG OID639824331 
ProductNADH dehydrogenase 
Protein accessionYP_971468 
Protein GI120611790 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTCCG ACATCGTGAT CGTGGGCGGA GGGGCCGGCG GGCTGGAACT GGCTGCGCGC 
CTCGGGCGCA GCCTCGGTGC GAAGCAGGGC CGCGAACGGG TGCTGCTGGT GGACCGTTCC
CCCTTCCATA TCTGGAAGCC CACGCTGCAC GAGGTGGCCG CCGGCACGCT GGACGTCCAC
CAGGAAGGAC TGTCCTACCC CGTACTGGCG CGGCGCAACC ATTTCGGCTT CGCCATCGGA
GACCTGGTAG GGCTGGACGC CGCGCGCAAG ACCATCGAGC TGGGCGAGAT ACGCAACGCC
GAGGGCGAAC TGCTGGTGCC GCGCCGCACG GTGAGCTACA CCCGCCTGGT GCTGGCCATC
GGCAGCGGCT CCAACGCCTT CGGCACGCCC GGCATCGAGC ATGCCTACCT GCTGGAGAAC
GTGCGCGATG CGCAGCGCTT CCATACCGAC TGGCTGGGCG CCTGCGCGCG GGCCTCGTTT
TCCGAAAGCC GGGCGCTGTC GATCGCCATC GTGGGCGCGG GCGCGACGGG CGTGGAACTG
TCCGCCGAAT TGCTGGAAGC CTATGCCGAG CTGCTCGAAA GCCTGGGCAG CAGCCAGCGC
TTTCGCCTGG ACATCACCCT GGTCGAAGGC GGCAGCCGCA TCCTGGGCGG CCTGCCGGAA
AAGATCTCCG CGCAGGCCGA AGTGGCGCTG CGCCGCAAGC AGGTGCAGGT GCTCACCGGC
ACGCGCGTGA CCGAGATCCG CCGCGGCGCC CTGGTCACCC CTGCCGGGGA GATCCCGGCC
GACATGGTGG TCTGGGCCGC GGGCATCAAG GCTGCCGAAG GCAATGCCCG CATGGGCCTG
GAAGTGAACC GCCTCAACCA GTTCATCGTG GACGACCGCC TGCGCACCTC GGCGCCCGAC
GTGCTGGCTT TAGGCGACTG CGCTGCCTGC CCGTGGGTCG ATGGCAAGAC CGTGCCCGCC
CGAGCGCAGG CCGCGCACCA GCAGGCCGAC TACCTGGCCA AGGTGCTGGG CGCGCTGCTG
CGCGAGCGGG AGATGACGGA ACCGTTCATC TACAAGGATT TCGGCTCGCT GGTTTCGCTG
GGCGACAACA AGGGCGTAGG CAACCTCATG GGAGGCCTGG GCGGGCGCAA CTTCTTCGTC
GAGGGCCTGA TCGCCAAGTG GATGTATATC TCCCTGCACC TGAATCACCA CCGCGCCATC
CTGGGTACCG GCAAGACGGT GGTGCTGGCG CTGGCGCGGC TGCTGCAGCA GCGCGTGTCC
GGCCGGCTCA AGCTCCATTG A
 
Protein sequence
MHSDIVIVGG GAGGLELAAR LGRSLGAKQG RERVLLVDRS PFHIWKPTLH EVAAGTLDVH 
QEGLSYPVLA RRNHFGFAIG DLVGLDAARK TIELGEIRNA EGELLVPRRT VSYTRLVLAI
GSGSNAFGTP GIEHAYLLEN VRDAQRFHTD WLGACARASF SESRALSIAI VGAGATGVEL
SAELLEAYAE LLESLGSSQR FRLDITLVEG GSRILGGLPE KISAQAEVAL RRKQVQVLTG
TRVTEIRRGA LVTPAGEIPA DMVVWAAGIK AAEGNARMGL EVNRLNQFIV DDRLRTSAPD
VLALGDCAAC PWVDGKTVPA RAQAAHQQAD YLAKVLGALL REREMTEPFI YKDFGSLVSL
GDNKGVGNLM GGLGGRNFFV EGLIAKWMYI SLHLNHHRAI LGTGKTVVLA LARLLQQRVS
GRLKLH