Gene Aave_3009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3009 
Symbol 
ID4666498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3318744 
End bp3320258 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content69% 
IMG OID639824211 
Producthypothetical protein 
Protein accessionYP_971350 
Protein GI120611672 
COG category[S] Function unknown 
COG ID[COG3333] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.790814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGAAA TTTTCAACGC CCTGCTGCAG GGCTTCGCGA CGGCGGCCAC GCCCGCCAAC 
CTGCTGTGGG CGCTGGTGGG CTGCGCGCTC GGCACGGCCG TGGGCGTGCT GCCCGGCATC
GGGCCCGCCG TGGCGGTGGC CATGCTGCTG CCCATCACCG CCAAGGTGGA GGTGACGGCC
TCCATGATCT TCTTCGCCGG CATCTACTAC GGCGCCATGT ACGGTGGATC GACCACCTCC
ATCCTGCTGA ACACGCCCGG TGAAACGGCC AGCATGGTCA CGGCGATGGA GGGCAACAAG
ATGGCCAAGA GCGGGCGCGC GGGCGCGGCC CTGGCCACGT CGGCCATCGG CTCGTTCGTC
GCCGGCACCA TCGCCACCGT GGTGGTCACG CTCTTCGCGC CGTCCGTGGC CGAATTCGCC
GTCAAGCTCG GGCCGCCCGA ATACTTCATG CTGATGGTGC TGGCCTTCAC CACGGTGAGC
GCGGTGCTCG GCCAGAGCAC GGTGCGGGGG CTCACCGCGC TGTTCCTGGG CCTCGCGCTG
GGCTGCGTGG GCATGGACCA GATTTCCGGC GCGGCGCGCT ATACGCTGGG CCAGCCCGAA
TTGCTGGACG GCGTCGACAT CGTGCTGGTG GCCGTAGGCC TGTTCGCGGT GGCCGAGGTA
CTGTATGCCG CCATGTACGA GGGCCGCCAG GTGGATACCC GCAACCCCAT GGGCCGGGTC
CACATGACGG CGCGCGACTG GAAGCGCTCC GTGCCCGCAT GGCTGCGCGG TACGCTGCTG
GGCACGCCGT TCGGCTGCAT TCCCGCGGGC GGCACCGAGA TTCCGACCTT CCTCAGCTAT
GCGACCGAGA AGAAACTCGC CAAGGGCGCG GACCGCGAGG AATTCGGCAC GAAGGGCGCC
ATCGAGGGCG TGGCCGGCCC CGAGGCCGCG AACAACGCCA CCGTCACGGC CGCGCTGATC
CCGCTGCTCA CGCTGGGCAT TCCCACCTCC AACACCACCG CGGTGCTGCT GGGCGCGTTC
CAGAACTACG GCATCAACCC CGGCCCGCAG CTGTTCTCCA GTTCGGCCGC GCTGGTGTGG
GCGCTGATCG CCTCGCTCTA CATCGGCAAC GTGATGCTGC TGGTGCTCAA CCTGCCCATG
GTGGGCCTGT GGGTGAAGCT GCTCAAGATC CCGAAGCCGC AGCTCTATGC TGGCATCCTG
ATCTTCGCCA CGGTGGGGGC CTACGGCATG CGCCAGAGCG CGTTCGACCT GTTCCTGCTC
TACGGCATCG GCCTGCTGGG CGTGATGATG CGCCGCTTCG ACTTCCCCAC CGCGCCCGTG
GTGGTCGGCA TGATCCTCGG GCCGCTGGCC GAGGCGCAGA TGCGCAACGC GATCTCGATC
GGCGAGGGCA ACTGGTCGGT GTTCGTGACG CGGCCGATGT CCCTCGCGCT GATCGTGATC
GTGGTCGCCG TGCTGGTGCT GCCCCGCCTG CTGCGCGGCT GGGCCGCCCG GCGGCTGCAG
GTGGCAACCC CCTGA
 
Protein sequence
MMEIFNALLQ GFATAATPAN LLWALVGCAL GTAVGVLPGI GPAVAVAMLL PITAKVEVTA 
SMIFFAGIYY GAMYGGSTTS ILLNTPGETA SMVTAMEGNK MAKSGRAGAA LATSAIGSFV
AGTIATVVVT LFAPSVAEFA VKLGPPEYFM LMVLAFTTVS AVLGQSTVRG LTALFLGLAL
GCVGMDQISG AARYTLGQPE LLDGVDIVLV AVGLFAVAEV LYAAMYEGRQ VDTRNPMGRV
HMTARDWKRS VPAWLRGTLL GTPFGCIPAG GTEIPTFLSY ATEKKLAKGA DREEFGTKGA
IEGVAGPEAA NNATVTAALI PLLTLGIPTS NTTAVLLGAF QNYGINPGPQ LFSSSAALVW
ALIASLYIGN VMLLVLNLPM VGLWVKLLKI PKPQLYAGIL IFATVGAYGM RQSAFDLFLL
YGIGLLGVMM RRFDFPTAPV VVGMILGPLA EAQMRNAISI GEGNWSVFVT RPMSLALIVI
VVAVLVLPRL LRGWAARRLQ VATP