Gene Aave_2900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2900 
Symbol 
ID4665725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3196310 
End bp3197980 
Gene Length1671 bp 
Protein Length556 aa 
Translation table11 
GC content66% 
IMG OID639824100 
Productphage uncharacterized protein 
Protein accessionYP_971242 
Protein GI120611564 
COG category 
COG ID 
TIGRFAM ID[TIGR01630] phage uncharacterized protein (putative large terminase), C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.280001 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.181567 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGA GCCCGAAGCA ATTCCTGGCC GACCTGGCGT CGCTCGCCGA TGGCCTGCGC 
CGCCAGATCG ACGCCAACCT CGACGGCTGG GACATGAGTC CCGAGGCCAT CGCCGAACGG
CGCCGCAAGG TCTGCGATCC GGTGAGCGGC TACGAGTACT GGGACCGCAA CTACTTCCCG
CACTACGGCC GCGCCGAGCC CAGTGCGCTG CATCTCTACC TCTACAAGCG CCTGCCCGAG
ATCATCGCAG CGAAGTCGGG CCAGCGCGAT GCACTGGCGG CGCCCCGCGG CGAGGCGAAG
TCCACGAAGA TCAGCATGAG CTTCGTGGCC TGGTGCGTGG TCACGGAAAA GCTCTGGTAT
CCGATCATCG TGATGGATGC CTTCGAGCAG GCGGCGGAGA TGCTGGAGGC GATCAAGGCG
GAGCTGGAAG CCAACCCGCG CATCGCGGGC GACTTCCCCG AGGCGTGCGG GCAGGGCCGC
GTCTGGCGCG CGGGCGTCAT CGTCACGCGC AACGGCCGGA AGGTGGAGGC CTTCGGCTCG
GCCAAGAAGA TCCGGGGCCG ACGTCATGGA GCACATCGCC CCGACCTGGC GGTGATGGAC
GACATCGAAA ACGACGAAAA CGTCACCACG CCAGCGCAGC GCGACAAGCT GCAGAAGTTC
GTCACCGCGA GCGTCCTCAA CCTGGGGCCG CCGGACGATT CGATGCACGC CATCCTCGTC
GGTACGGTGC TGCACTACGA CTCGGTGCTG GCGCGGTTTC TGAAGAATCC GCTGTGGAAC
CGCAAGGTTT TTAAGGCCGT CTTGCAGTGG CCGGAGAACA TGCACCTGTG GGAGCAGTTC
GAGGGACTGC TGCTGGGAGC CGACACGCCG CAGCGCGGTG AGGCCGAGGC CATGGCGCTG
TACCGCCAGC ACCAGGCAGA GATGGACAAG GGCGCGGTGG TGAGCTGGCC CGCGCTGCGC
CCGCTGGTCA AGCTGATGAT CCGCCGTGCG CGCGAAGGGC ACGCGGCATT CGACTCGGAG
CAGCAGAACG ACCCGGTGGC GGGCGAGGAT GCGCCGTTCG CGAACAGCAT CCGCTTCTGG
GTCAACCGCG CGGCCGAGTG GATCTTCTAC GGTGCCTGCG ATCCCAGCTT GGGAAGGGCA
GGGAACAGCC GCGATCCGAG CGCGATAGGC GTGGGTGGCT ACAACCGCGA AACGGGCGTG
CTCGATGTGG TCGAGGCCGC CATCAAGAAG CGCGTGCCTG ACCGGATCAT CAGCGATGTG
ATCGAGATGC AACGCGAGTA CGGCTGCGTC GTGTGGGGCT TCGAGTCCGT CCAGTTCCAG
GAATTCCTGC GCACCGAGCT GGTCAAGCGC AGCGCGCTGC TCGGGGTGCC TGTGCCGGCC
CGAGGCCTGA TCCCCATCAG CGACAAGCTG CTGCGCATCG AGAGCCTGCA GCCGCACATG
CACAACGGCT TGCTCCGGTT GCACAGCAGC CAGACCACGC TGATCGATCA GTTCCGCCAC
TTCCCCAAGG CCGATCACGA CGACGGCCCC GACATGGTCC AGATGCTATG GATGCTGGCC
GTGACGGGTG GCATGGCTGC AGCCGCTCAG GGCGGCAGCT CCCGCCAACC CCAATCCGCG
CGAGAGCGCT TCGCGCGCCA GGCGGCGCGC ATGTTCAGAA AGCAACGATG A
 
Protein sequence
MAKSPKQFLA DLASLADGLR RQIDANLDGW DMSPEAIAER RRKVCDPVSG YEYWDRNYFP 
HYGRAEPSAL HLYLYKRLPE IIAAKSGQRD ALAAPRGEAK STKISMSFVA WCVVTEKLWY
PIIVMDAFEQ AAEMLEAIKA ELEANPRIAG DFPEACGQGR VWRAGVIVTR NGRKVEAFGS
AKKIRGRRHG AHRPDLAVMD DIENDENVTT PAQRDKLQKF VTASVLNLGP PDDSMHAILV
GTVLHYDSVL ARFLKNPLWN RKVFKAVLQW PENMHLWEQF EGLLLGADTP QRGEAEAMAL
YRQHQAEMDK GAVVSWPALR PLVKLMIRRA REGHAAFDSE QQNDPVAGED APFANSIRFW
VNRAAEWIFY GACDPSLGRA GNSRDPSAIG VGGYNRETGV LDVVEAAIKK RVPDRIISDV
IEMQREYGCV VWGFESVQFQ EFLRTELVKR SALLGVPVPA RGLIPISDKL LRIESLQPHM
HNGLLRLHSS QTTLIDQFRH FPKADHDDGP DMVQMLWMLA VTGGMAAAAQ GGSSRQPQSA
RERFARQAAR MFRKQR