| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2788 |
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| Symbol | |
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| ID | 4669352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3061255 |
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| End bp | 3061947 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639823987 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_971130 |
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| Protein GI | 120611452 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACAC CCCCTGACCG GAACAAGGTA TTGATTCTCG GAGCATCCCG CGGCCTGGGC
CGCAGCCTGC TGGGCGCCTT CGGCGCGGAC GGCCATGCCG TGACCGCCGT CGCCAGGCGC
TTCGACGGCA GCGAGGCCGA GCAGGCCGGA CGCATCCTGA CTGCAGATCT CACGCAGGAG
GCGGGACTGG CGTCGGTGAC CGCCGACATG CAGCGGGCCG ACTATGACTG CATCATCTAT
GTGGCGGGCA TCTGGGAGCA GCAAGGCTTC GAGCGCGCCT CGGAACAGGA GGTTCGCGGC
ATCGTCGCCA CGAACATCAC GGCACCGCTG ATCATCGGCC AGCGGTTGCT CGCGCTGTGC
GCTGCAACAC CACCTCGCCG GCGCCACTAT TTCCTTATCG GGTCAACCAG CGGCCTCGAC
AACTCCGGTA GCACGTCATG TGCATATGTC GCGTCCAAGT TCGCGTTGCG AGGCCTGACG
CACTCGCTGC GCGAACAGGG AAGGCCGTTG CGCCTGCATG TCACCTGCCT TTCCCCGGGA
TCGATCCGCA GTGACCAGAG CGGCCAGTCG TCCCACCCGG CGCGCATACC GCCGGACGAC
ATCTACCAAT TGATCCGCTG CATTCTCTCG CTGGACGACC CGACCCTGGT GAAGGAGCTC
GTCGTCCCGG CCATCGAGGA CACCGACGTC TAG
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| Protein sequence | MKTPPDRNKV LILGASRGLG RSLLGAFGAD GHAVTAVARR FDGSEAEQAG RILTADLTQE
AGLASVTADM QRADYDCIIY VAGIWEQQGF ERASEQEVRG IVATNITAPL IIGQRLLALC
AATPPRRRHY FLIGSTSGLD NSGSTSCAYV ASKFALRGLT HSLREQGRPL RLHVTCLSPG
SIRSDQSGQS SHPARIPPDD IYQLIRCILS LDDPTLVKEL VVPAIEDTDV
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