| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2727 |
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| Symbol | |
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| ID | 4665287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 2994123 |
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| End bp | 2994701 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639823926 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_971069 |
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| Protein GI | 120611391 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.742597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGTCG CTCCCACTCG ACTCGCCGCA GTGGCGCTCG CGCTTTGCCT GTGGATCCAG
TGCGCCAGCG CAGGCCCCGA AACCTGCCTT CGCGGGCACA GCCGCTCCGA ACCCTGCCAG
CGAATGCTGC AGGACTACTG GCGTCACGAA GCGGCCATCA CTGCGATCGC CCGGCACTAT
GGTCTTGAGC CGGCATTGCT CAAAGCGCTC GTTGCCGTCG AAAGCGGCTA CAACGCGGCG
GCTCGCTCGC CCGCCAATGC TCGTGGCCTG ACCCAGGTGC TGCCCTCCAC CGCCGCCGGC
GTGGGCTTGC AGCAGCCCGA ACAGAACCTG TACCGCCCGG AGCTCGCACT GGCGGCTGGC
GCGGCGTACC TACGCCAGAT GTGGTTCGAG TTCCGCGCGT GGGATCTCGC GCTGGCTGCT
TACAACGCCG GGCCCGGCGC CGTGCGCAAG CACGGTGGCA TACCACCCTA CCGAGAAACG
CAGGCCTACG TGCCGAAGGT CCTGGCCCTC TACCGGGAAT TCGCCCTTGC CGAAACGCTG
GCCGCGTCCC GCTCAATGCC CCAAGGAAAC ACCCCATGA
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| Protein sequence | MTVAPTRLAA VALALCLWIQ CASAGPETCL RGHSRSEPCQ RMLQDYWRHE AAITAIARHY
GLEPALLKAL VAVESGYNAA ARSPANARGL TQVLPSTAAG VGLQQPEQNL YRPELALAAG
AAYLRQMWFE FRAWDLALAA YNAGPGAVRK HGGIPPYRET QAYVPKVLAL YREFALAETL
AASRSMPQGN TP
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