Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2727 |
Symbol | |
ID | 4665287 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 2994123 |
End bp | 2994701 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639823926 |
Product | lytic transglycosylase, catalytic |
Protein accession | YP_971069 |
Protein GI | 120611391 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.742597 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGTCG CTCCCACTCG ACTCGCCGCA GTGGCGCTCG CGCTTTGCCT GTGGATCCAG TGCGCCAGCG CAGGCCCCGA AACCTGCCTT CGCGGGCACA GCCGCTCCGA ACCCTGCCAG CGAATGCTGC AGGACTACTG GCGTCACGAA GCGGCCATCA CTGCGATCGC CCGGCACTAT GGTCTTGAGC CGGCATTGCT CAAAGCGCTC GTTGCCGTCG AAAGCGGCTA CAACGCGGCG GCTCGCTCGC CCGCCAATGC TCGTGGCCTG ACCCAGGTGC TGCCCTCCAC CGCCGCCGGC GTGGGCTTGC AGCAGCCCGA ACAGAACCTG TACCGCCCGG AGCTCGCACT GGCGGCTGGC GCGGCGTACC TACGCCAGAT GTGGTTCGAG TTCCGCGCGT GGGATCTCGC GCTGGCTGCT TACAACGCCG GGCCCGGCGC CGTGCGCAAG CACGGTGGCA TACCACCCTA CCGAGAAACG CAGGCCTACG TGCCGAAGGT CCTGGCCCTC TACCGGGAAT TCGCCCTTGC CGAAACGCTG GCCGCGTCCC GCTCAATGCC CCAAGGAAAC ACCCCATGA
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Protein sequence | MTVAPTRLAA VALALCLWIQ CASAGPETCL RGHSRSEPCQ RMLQDYWRHE AAITAIARHY GLEPALLKAL VAVESGYNAA ARSPANARGL TQVLPSTAAG VGLQQPEQNL YRPELALAAG AAYLRQMWFE FRAWDLALAA YNAGPGAVRK HGGIPPYRET QAYVPKVLAL YREFALAETL AASRSMPQGN TP
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