| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2719 |
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| Symbol | |
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| ID | 4665443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 2985165 |
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| End bp | 2986115 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639823918 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_971061 |
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| Protein GI | 120611383 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.616363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAGCA CCGTCAAACC CTTCCTCGAC GCGATCACCG ACGTGCGCGC CAGCATCAAC
GAGCCAGGCC GGAGCCTGCA GTTCCCTGGA CCCGTCGTCC TGCAGCCCGA AATCCAGCCG
TATGTGGCCG GGCTGCTCAA GCACTTCATG GAACTTCAAG CCGTGGACGC GACCTTGCAC
CATGAAGGCC TGGTTTGGCG TGGCCACCTG GACCGCAGCG TGGTGGACGG GCCATGGGTC
AACTTCCGCA AAATGCCCGA GCAGCCGCCG ACCCTGGACA CGCTGCCATC CCCCTTGCCA
ACCGTAATTC GCGAGTGGCT CCTGAAGCCT TCACACAGCG AAGGGGGCCT GATGCTGGTG
GCCGGCCCCA CGGGGGCAGG GAAGACGACG ACGGCGTCTG CGACCGTCAT ATCGCGCCTC
AAGGAGCTCG GCGGTTTCGC TACGACCGTC GAGCAGCCGC CGGAGCAGCC GCTCAACGGC
TGGCACCATG GGGCCACAAA AAAAGGCTAT TGCTCCCAGG CCTGGGTGAA GATCGAAGGC
GAAAGTCCGT GGGCCGCGGC GCTCACCGGA GTGCTCCGCT CCCAGGCGGC CGGCACGCCG
ACGATGCTCT TCGTCGGTGA GATCCGAGAG GCCGAGGCCG CCCGGGTCGC GCTGCAGGCC
GCGGGCAACG GGTTCCTGGT CATCTGCACT TCCTTCGCCA CGGACACGGT GTCCGCCGTG
AGTTCCTTTG CGAAGTGCCT GGACGAAAGC CAGCAGGAGA TGTTCTCTCT GCTCCTGCGA
GGTGTCGTGT TTCAGAAGCT CGACGGCAAG CTCCTCACGG CCAAGCTGCT GGAATCCACG
TTGGCCGTGC AGCAGGCGAT CGCCGCTGCA AAGTACGCAT CGCTCGAAGG CGAGGCTCAG
CGCCAGGCCA ATGAGCGGAT GCTTCTCAGC ACCAGGTTCG CCACGCATTG A
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| Protein sequence | MDSTVKPFLD AITDVRASIN EPGRSLQFPG PVVLQPEIQP YVAGLLKHFM ELQAVDATLH
HEGLVWRGHL DRSVVDGPWV NFRKMPEQPP TLDTLPSPLP TVIREWLLKP SHSEGGLMLV
AGPTGAGKTT TASATVISRL KELGGFATTV EQPPEQPLNG WHHGATKKGY CSQAWVKIEG
ESPWAAALTG VLRSQAAGTP TMLFVGEIRE AEAARVALQA AGNGFLVICT SFATDTVSAV
SSFAKCLDES QQEMFSLLLR GVVFQKLDGK LLTAKLLEST LAVQQAIAAA KYASLEGEAQ
RQANERMLLS TRFATH
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