Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2662 |
Symbol | |
ID | 4666411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 2922336 |
End bp | 2922968 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639823865 |
Product | superoxide dismutase |
Protein accession | YP_971008 |
Protein GI | 120611330 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0605] Superoxide dismutase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00481875 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.116987 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGCACA CGCTGCCCGC CTTGCCTTAC GCCTACGATG CCCTGGAGCC GCACATCGAT GCGCGCACCA TGGAGATCCA CCACACCAAG CACCACCAGA CCTACGTCAA CAATCTGAAC GCCGCGCTGG AAGGCACGCC GCATGCCGAC ACCCCGGTGG ATCAACTCGT CGCGGGCCTT CGGTCCTTGC CGGAATCACT GCAGACGGCC GTGCGCAACA ACGGCGGAGG CCATGCCAAC CACAGCCTGT TCTGGACCGT CATGGCTCCC GAAGGGCAGG GCGGCGGCGG ACAGCCGGGC GGTGCGCTCG GCGAGGCGAT CGACCGGGAC CTGGGCGGTT TCGATGCGTT CAAGGAGGCT TTCACCAAGG CGGCGCTCAC CCGCTTCGGC AGCGGCTGGG CCTGGCTGGT GGTCGATGGT GCCGGCCGGC TCGCGGTCGA GAGCAGCGGC AACCAGGACA GCCCGCTCAT GGCCGGGCTG CTGTCCGGGC ACACGCCGAT CCTCGGACTC GATGTGTGGG AGCACGCCTA CTACCTTCAG TACCAGAACC GGCGCCCTGA ATACATCGCC GCGTTCTATC GTGTGATCCG TTGGGACGAG GTGGCGCGCC GGTACGCGAA GGCCCGCGGC TGA
|
Protein sequence | MPHTLPALPY AYDALEPHID ARTMEIHHTK HHQTYVNNLN AALEGTPHAD TPVDQLVAGL RSLPESLQTA VRNNGGGHAN HSLFWTVMAP EGQGGGGQPG GALGEAIDRD LGGFDAFKEA FTKAALTRFG SGWAWLVVDG AGRLAVESSG NQDSPLMAGL LSGHTPILGL DVWEHAYYLQ YQNRRPEYIA AFYRVIRWDE VARRYAKARG
|
| |