| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2600 |
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| Symbol | |
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| ID | 4669130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 2847750 |
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| End bp | 2848649 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639823803 |
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| Product | 3-hydroxyisobutyrate dehydrogenase |
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| Protein accession | YP_970946 |
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| Protein GI | 120611268 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | [TIGR01692] 3-hydroxyisobutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00798756 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.460632 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGATCG CATTCATCGG CCTGGGCAAC ATGGGCGGCC CCATGGCCCT GAACCTGCAC
AAGGCCGGCC ACGACGTCGG CGCGTTCGAC CTGTCCAGGC CCGCCTGCGA CAGGCTGGCG
GCCGACGGGG TGCGCATCGC CACCGACGCC AGCGCCTGCG TGGCGGGTGC CGAGGTGGTC
ATCAGCATGC TGCCGGCCAG CCCGCATGTG GAGGCGCTTT TCCTGGGAGG CGGCCAACAG
CCCGGCCTGC TGCCCCAACT GGCCGCAGGC ACGCTGGTGA TCGACTGCTC GACCATCGCG
GCGGCCACAT CGCGCAAGGT GGCCGATGCC GCGCGGGAGC GCGGCATCGC CTTCATCGAC
GCGCCTGTCT CCGGCGGCAC GGGGGGCGCC GTCGCCGGCA CGCTGACCTT CATGGTGGGC
GGCGATGCGG CCGATCTGGA ACGCGCGCGC CCGGTGCTGG AGAAGATGGG CGCCAACATC
TTCCACGCGG GCGGCGTGGG CGCGGGGCAG ACCGCCAAGA TCTGCAACAA CATGCTGCTG
GGCATCCTGA TGGCCGGCAC GAGCGAGGCC CTCGCCCTGG GCGCCGCCAA CGGCCTGGAT
CCGGCAGTGC TCAGCGAGAT CATGCGCCGC AGCTCGGGCG GGAACTGGGC CCTGGAAAAA
TACAACCCCT GGCCGGGCGT CATGCCCCAG GCCCCGGCGA GCAAGGACTA CGCGGGAGGC
TTCGGCACCG ACCTGATGCT CAAGGACCTG GGGCTCGCGC AGGAGAACGC TGCTGCGGTG
AAGGCGGCCA CGCCCCTGGG CGGACTCGCG CGCAGCCTGT ACGCGGCGCA CAGCCTCGCA
GGCCATTGCG AGCTGGATTT TTCCAGCATC GTGCGCCTCG TCCGCAAACC CGGTGCCTGA
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| Protein sequence | MKIAFIGLGN MGGPMALNLH KAGHDVGAFD LSRPACDRLA ADGVRIATDA SACVAGAEVV
ISMLPASPHV EALFLGGGQQ PGLLPQLAAG TLVIDCSTIA AATSRKVADA ARERGIAFID
APVSGGTGGA VAGTLTFMVG GDAADLERAR PVLEKMGANI FHAGGVGAGQ TAKICNNMLL
GILMAGTSEA LALGAANGLD PAVLSEIMRR SSGGNWALEK YNPWPGVMPQ APASKDYAGG
FGTDLMLKDL GLAQENAAAV KAATPLGGLA RSLYAAHSLA GHCELDFSSI VRLVRKPGA
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