Gene Aave_2568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2568 
Symbol 
ID4668505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2819361 
End bp2819945 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content62% 
IMG OID639823772 
Productsuperoxide dismutase 
Protein accessionYP_970915 
Protein GI120611237 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0605] Superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.28771 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00195196 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGAACATA CCCTGCCACC GCTGCCTTAC GCTATCGACG CCCTGGCTCC GCACTACAGC 
CAGGAAACCC TGGAGTACCA CCATGGCAAG CACCACAATG CCTACGTGGT GAACCTCAAC
AACCTCCAGA AGGGCACCGA ATTCGAGAAC ATGCCCCTCG AGGAGATCAT CAAGAAGTCC
AGCGGCGGCA TCTACAACAA CGCCGCCCAG ATCTGGAACC ACACCTTCTT CTGGAACTGC
ATGGCTCCCA ATGGCGGCGG CGAACCCTCG GGCGCGCTGG CCGACGCCAT CAAGGCGAAG
TGGGGCAGCT ATGCCGCCTT CAAGGAAGCC TTCGTGAAGA GCGCCGTGGG CAACTTCGGC
TCCGGCTGGA CCTGGCTGGT GAAGAAGGCG GACGGCAGCG TGGACATCGT CAACACCGGT
GCCGCCGGCA CGCCCCTGAC CACCGCCGAC AAGGCGCTGC TGACCGTGGA CGTCTGGGAG
CACGCCTACT ACATCGACTA CCGCAACCTG CGTCCCAAGT TCGTCGAAAC CTTCCTCGAC
AAGCTGGTGA ACTGGAAGTT CGCGGAAAGC AATTTCGCGG CCTGA
 
Protein sequence
MEHTLPPLPY AIDALAPHYS QETLEYHHGK HHNAYVVNLN NLQKGTEFEN MPLEEIIKKS 
SGGIYNNAAQ IWNHTFFWNC MAPNGGGEPS GALADAIKAK WGSYAAFKEA FVKSAVGNFG
SGWTWLVKKA DGSVDIVNTG AAGTPLTTAD KALLTVDVWE HAYYIDYRNL RPKFVETFLD
KLVNWKFAES NFAA