| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2556 |
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| Symbol | |
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| ID | 4669201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 2806017 |
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| End bp | 2810042 |
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| Gene Length | 4026 bp |
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| Protein Length | 1341 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639823760 |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_970903 |
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| Protein GI | 120611225 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0904088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00638433 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCGCGA TGCAGGCCCA CCAGGTCATC ATCGTCTGCG GCGAGACCGG CTCGGGCAAG
ACCACCCAGC TGCCCAAGAT CGCGCTGGCG CTCGGCCGCG GCAGGTGCAA TGCCAGGCCG
GGCGAGAAGG GGCGCCTGAT CGGCCACACG CAGCCGCGCC GGATCGCGGC CAGCAGCGTC
GCCAAACGCA TCGCCGAAGA GCTGCAGACG CCGCTGGGCG ACGTGGTGGG TTACAAGGTG
CGCTTCCAGG ACCGCCTGTC GCGCGATGCC TCCGTCAAGC TGATGACGGA CGGCATCCTG
CTGGCCGAGA CGCAGACCGA CCCGCTGCTG ACGGCCTACG ACACCATCAT CATCGACGAG
GCGCACGAAC GCAGCCTGAA CATCGACTTC CTGCTGGGCT ACCTGCGCCA GATCCTGCCG
CGCCGGCCCG ACCTGAAAAT CGTGGTCACC TCGGCCACCA TCGACGCCGA GCGGTTCGCG
AAGCACTTCG AGTCGGCGAA GGGGCCTGCT CCCGTCATCT ACGTATCCGG CCGCACCTTC
CCGGTGGAGC AGCGGTACCG GCCTTTCGAG GAAAGCCGCG ACTACGGCTT GAACGAGGCC
ATCGCCGACG GCGTGGACGA ACTCTGGGCC GGCAACGCGG CGGGCGACAT CCTCGTCTTC
CTGCCGGGCG AGCGCGAGAT CCGCGAGGCC GCCGATCACC TGCGCAAGCA CCTGGCGCAC
CAGCCGGTGA TGCGCGGCGC CGAGGTGCTG CCGCTGTTCG CGCGCCTCTC GCAGGCCGAG
CAGGACCGCA TCTTCGAAGG CCATACGGGC CGCCGCATCG TGCTGGCCAC CAACGTGGCC
GAGACATCGC TCACGGTGCC GGGCATCCGT TATGTGATCG ACGCCGGCAC CGCGCGCGTG
AAGCGCTACA GCTTCCGCAG CAAGGTCGAG CAACTGCTGA TCGAACCCGT GAGCCAGGCG
GCGGCCAACC AGCGGGCAGG CCGCTGCGGC CGCGTGGCCA ACGGCATCTG CATCCGGCTC
TACGACGAAC CCGACTTCAA CAGCCGGCCG CGCTTCACCG ACCCTGAAAT CCTGCGCTCC
TCGCTGGCGG GCGTGATCCT GCGCATGAAG TCGCTGCACC TGGGCGACGT GGCCCAGTTC
CCGTTCATCG AGGCGCCCTC GGGCCGCGCG ATCGCCGACG GCTACCAGCT GCTGGCCGAA
CTGGGCGCGG TGGACGATGC CAATGAACTC ACGCCCATGG GCGTGGAACT CTCGCGATTG
CCGCTCGACC CGCGCGTGGG CCGCATGATC CTCGAGGCGC GCGACCGCCA GGCGCTGGAC
GAAGTTCTGG TGATCGCCTC GGCCCTGTCG GTGCAGGACG TGCGGGACCG GCCGCTCGAG
GCCCAGCAGC AGGCCGACCA GGCCCATGCC AAGTTCGACG ACGAGAAAAG CGAGTTCAGC
GGCTACCTCA AGCTCTGGAA GTGGATCAAC GAAGCCCGCG GCGGCGTGCC GAGCCTGCCC
TCCGCACGCG CGCAGCGCGA TGCCGCGCGC AAGGGCGCGC CTTCGCAGGC CGTGCTGCCG
GTGGCCCAGC GCCAGACGCG CGGCAGTGCC GACGCGGCCG CGCCCGCAGC GGCCGCCGCG
GCGTCCGTGC CGGCCCCCGC GCCCACCCAC AAACTGAGCA ACCGGCAATA CGAATCGCTG
CTGCGCCAGA ACTTCATCAG CGTGCGGCGG CTGCGCGAAT GGCGCGACAT CCACACGCAA
CTGCTCACCG TGGTCACCGA GCACCGCTGG CGCATCAATC CGCAGCCGGC CAGCTACGAG
CAGATCCACC GCTCCATGCT CGCCGGCCTG CTGGGCAACA TCGGCGTGAA GGGCGAGGAG
GAGGACTGGT ACCTCGGCGC GCGCGGCATC AAGTTCTACA AGCATCCCGG GGCGAACCTG
TCGAAGAAAC CGGGGCGCTG GATCGTGGCC GCGGAACTGG TCGAGACCAC GCGCCTCTTC
GGGCGCGGCA TCGCGGCCAT CGAGCCGCAA TGGATCGAGG AAATGGGCGG CCACCTGCTC
AAGAAGCAGA TGCTGGACCC GCACTGGGAG CGCAAGGCCG CGCAGGTGAC GGCGCTGGAG
CGCGCCACGC TCTACGGCAT CGTCATCTAC AACAACCGGC GCGTGAACTT CGGCAAGGTG
GACCCGCGCA CCGCCCGCGA GATCTTCCTG CGCGAGGCGC TGGTGGGCGA CCAGTGGCCG
CAGGACTGGG AGCGGCGCCT GCCGTTCCTG CCCGCCAACC GCAAGCTCAT CGCGAAGGTG
GAGGAACTGG AGCACAAGTC GCGCCGCCAG GACGTGCTGG TGGACGAGGA GCTCATCTAT
GCCTTCTACG ACCAGCAGGT ACCCGCCGAC ATCTGCACCG GCGCTGACTT CGAATCCTGG
TACCGCGAGG CCAGCCGCGC GAAACCGGAC CTTCTCAAGC TCACGCGCGA CGAACTGATG
CGGCACGAGG CCGCCGGCAT CACCACCAGC GCCTTCCCGC GCGTGGTGCG GCTGGGCGGC
GTGGACTGCG CGGCCACCTA CCTGCACGAG CCCGGCGATC CGCGGGATGG CGTCACCGTG
ACGGTACCGC TCTTCGTGCT CAACCAGGTC AGCGAAGAGC GCTGCGAATG GCTGGTGCCG
GGAATGCTCA AGGACAAGAT CCAGGCGCTG CTCAAGAGCC TGCCGCAGCG CCCGCGCAGC
CGTTTCGTGC CGTTGCCGGA CAATGCCGCG CGCCTGGCCG AGCTGCTCGG CACGCCCGAG
CGCTTCGGGC AGGGCAGCCT CGTGGACGTG CTGCTCAAGC AGGTGCGCGA CGAGACTTCG
CTGGACGTGA AGCGCGCCGA CTTCAAGCTC GACATGCTCA GCCCGCACCT GTTCATGAAC
TTCCGGGTGG TCCACGAGGA CGGCCGGCAA CTGGGCCAGG GGCGCAATCT GGGCGCGCTC
AAGGCCGAAT GGGGCGCCAA GGCCCGGGGC GCGTTCCAGG CCCTGGCGGG GCTCAAGCTC
GGGGGCACCG CCACGGAAGC CGAGCGCAAC GCGGCGCCTG CCGAGGCAGC CCCCGGCGCC
CGGCCCGGCC AAGGCGCCGC GCACGGCAGG CCCGCGGACA GCCGTGCGGC TTCCGCTGCC
GGCAAACCGG CCGGTGCCGG CCCGGCGGCC GCTCCGGCAC CGGCGGCCGT GCCGGCGGGC
CAGCGCTACA CGGCCTGGTC CTTCGGCGAA CTGCCCGAGC TGATGGAAAT CCGCAAGGGT
GGGCAGACGC TCATCGGTTT CCCGGCGCTC ATCGATGGCG GCGATGCCGT GACCATCGAA
GTGTTCGACG AACCCGGTGT GGCCGCGGCG CGCCACCGCG CGGGCCTGCG CCGGCTGTTC
GCGCTGCAGA TCAAGGATGC GCTCAAGTAC CTGGAGAAAA ACATTCCGGA CCTGCAGAAG
ATGGCAGTGG CCTACATGCC GCTGGGTACG CAGGAGGAAT TGCGCGCGCA GATCATCGAT
GTGGCACTGG ACCGCGCCTT CCTGGTCGAT CCCCTGCCAA CGACCGAGGC AGACTTCCAG
CGCCGCGTGC AGGAAGGCCG CGGCCGGCTC ACGCTGATCG CCAACGAAGT CGCGCGGCTG
GCCGGCGCGA TCCTGCTCGA ATACGCCGCG GCGGCACGCA AGATCAAGGA CACGAAAGGT
GCGCCCGAGG CCACGCAGGA CGCACAGCAG CAACTGCAAA GGCTCATTCC GAAGAACTTC
CTGGCGGTGG CGCCCTGGTC GCAGCTCGCG CACTTCCCGC GCTACCTGAA GGCCATCACC
CTGCGCCTGG ACAAGGTGCG CGCCGATGCG GCACGCGACG CCACGCGGCT CGCGGAGCTG
CGCCCCCAGG AGCAGCGCTA CTGGCGGCTG GTGGCCGAGC GCAAGGGCCA GGTGGATGCG
CGCATGCAGG AGTTTCGCTG GCTGCTGGAG GAACTGCGGG TGAGCTTCTT CGCGCAGGAA
CTCCGCACGC CGCAGCCCGT GAGCGTGAAG CGCCTGGACA AGCTCTGGGC GCAGATCAAC
AGCTGA
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| Protein sequence | MAAMQAHQVI IVCGETGSGK TTQLPKIALA LGRGRCNARP GEKGRLIGHT QPRRIAASSV
AKRIAEELQT PLGDVVGYKV RFQDRLSRDA SVKLMTDGIL LAETQTDPLL TAYDTIIIDE
AHERSLNIDF LLGYLRQILP RRPDLKIVVT SATIDAERFA KHFESAKGPA PVIYVSGRTF
PVEQRYRPFE ESRDYGLNEA IADGVDELWA GNAAGDILVF LPGEREIREA ADHLRKHLAH
QPVMRGAEVL PLFARLSQAE QDRIFEGHTG RRIVLATNVA ETSLTVPGIR YVIDAGTARV
KRYSFRSKVE QLLIEPVSQA AANQRAGRCG RVANGICIRL YDEPDFNSRP RFTDPEILRS
SLAGVILRMK SLHLGDVAQF PFIEAPSGRA IADGYQLLAE LGAVDDANEL TPMGVELSRL
PLDPRVGRMI LEARDRQALD EVLVIASALS VQDVRDRPLE AQQQADQAHA KFDDEKSEFS
GYLKLWKWIN EARGGVPSLP SARAQRDAAR KGAPSQAVLP VAQRQTRGSA DAAAPAAAAA
ASVPAPAPTH KLSNRQYESL LRQNFISVRR LREWRDIHTQ LLTVVTEHRW RINPQPASYE
QIHRSMLAGL LGNIGVKGEE EDWYLGARGI KFYKHPGANL SKKPGRWIVA AELVETTRLF
GRGIAAIEPQ WIEEMGGHLL KKQMLDPHWE RKAAQVTALE RATLYGIVIY NNRRVNFGKV
DPRTAREIFL REALVGDQWP QDWERRLPFL PANRKLIAKV EELEHKSRRQ DVLVDEELIY
AFYDQQVPAD ICTGADFESW YREASRAKPD LLKLTRDELM RHEAAGITTS AFPRVVRLGG
VDCAATYLHE PGDPRDGVTV TVPLFVLNQV SEERCEWLVP GMLKDKIQAL LKSLPQRPRS
RFVPLPDNAA RLAELLGTPE RFGQGSLVDV LLKQVRDETS LDVKRADFKL DMLSPHLFMN
FRVVHEDGRQ LGQGRNLGAL KAEWGAKARG AFQALAGLKL GGTATEAERN AAPAEAAPGA
RPGQGAAHGR PADSRAASAA GKPAGAGPAA APAPAAVPAG QRYTAWSFGE LPELMEIRKG
GQTLIGFPAL IDGGDAVTIE VFDEPGVAAA RHRAGLRRLF ALQIKDALKY LEKNIPDLQK
MAVAYMPLGT QEELRAQIID VALDRAFLVD PLPTTEADFQ RRVQEGRGRL TLIANEVARL
AGAILLEYAA AARKIKDTKG APEATQDAQQ QLQRLIPKNF LAVAPWSQLA HFPRYLKAIT
LRLDKVRADA ARDATRLAEL RPQEQRYWRL VAERKGQVDA RMQEFRWLLE ELRVSFFAQE
LRTPQPVSVK RLDKLWAQIN S
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