| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2544 |
|---|
| Symbol | |
|---|
| ID | 4666143 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 2793409 |
|---|
| End bp | 2793990 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 639823748 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_970891 |
|---|
| Protein GI | 120611213 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3545] Predicted esterase of the alpha/beta hydrolase fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.424975 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0227832 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTCG CCGGCCGTTC CGTCATCGTG GTGCCGGGCT GGCGGGACTC CGGCCCCGGC
CATTGGCAGA CGCTCTGGGC GGACCGCCTG CCCGGGGCGC GCAGGGTGGT GCAGGACGAC
TGGATCACCC CGACGCGCGA AGCCTGGGTC CGGACCCTGG AGCGCACCGT GCAGGAGGCG
CCCCATCCGG TGGTCATCGT CGCCCACAGC CTGGGCTGCA TCGCGTCGGC ACACATGGGC
CCGCAGGCCC GGTCCCGCGT GGCGGGGGCC CTGCTGGTGG CGCCCGCCGA CCCGGAGCGC
CGGGCCGTGC TCAGCGATTT CGCCCCCGTG CCCTATGAGC CCTTGCCCTA TCGCAGCATC
CTGGTGGCCA GCAGCAACGA TCCGTATTGC CCCGTCCGCC TGGCCGGTGC CTATGCCCGG
GCGTGGGGCA GCGAATTCGT CCGGCTGCAG CAGGCCGGAC ACATCAACGT GGAGTCCGGC
CACGGCGAGT GGCCCCTCGG CTGGGCCTTG CTGCACTCCC TCGCGGAAGA CGTGGCCTGG
GGACCGGGCG GCGGTGCGGA GCCGGTGCGC TCCGCGGCCT GA
|
|---|
| Protein sequence | MTLAGRSVIV VPGWRDSGPG HWQTLWADRL PGARRVVQDD WITPTREAWV RTLERTVQEA
PHPVVIVAHS LGCIASAHMG PQARSRVAGA LLVAPADPER RAVLSDFAPV PYEPLPYRSI
LVASSNDPYC PVRLAGAYAR AWGSEFVRLQ QAGHINVESG HGEWPLGWAL LHSLAEDVAW
GPGGGAEPVR SAA
|
|---|
| |