Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2538 |
Symbol | |
ID | 4667110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 2787319 |
End bp | 2788884 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639823742 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_970885 |
Protein GI | 120611207 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0549264 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.252917 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTTTTT CTCGCATGAC GGTCGCCAGA CGCCTGGCCG TCGCTTTCGG GATCGTGGTG GGGCTGCTGG TCGTCGTGGC CGGCATCGCC CTGGTCAAGG TGCAGGCCAT CGACAGGGCC CTGGCCGCCA ACGGTTCGGA GCACGTGCCG GTCCAGCGGT ACGCCATCAA TTTCCGGGGC TCCGCGCACG ACCGCTCCAT CGCCGTGCGC GATGTCGTCC TCGCGGCCAC ACCGCAGCAG CGGGAGCGCG AGATCGCCGT CATCGCTTCG CTCGCGGCGT TCTATGCGCA GTCCGCCGGT CCGCTGGAGA GCATCCTGGG CAGGCCCGGT GCCGAACCGC AACTGGGCGC GCTCTATGCC GACATCCGCC GTGCGGAGGC CCAGGCCGTG GCGTCCACGC AGCGCATCGT GGCGCTCGCG GGCCAGGACG ACGCCCAGGC GCGCGAAGTG CTCTGGAAGC AGGCCAAGCC CCAGTACGTG CAATGGCTGG CAGCCATCAA CCGGCTGATC GATTTCGAGG AAGCGCGCAT CCAGGCCGAG AACGCCACGG CCATGGCGCA GGCGAGCGGA TTCCGCGCCG TGATGATGGG CGCGCTGGTT CTTGCGCTGG CCGCCAGCGT GCTGGTGGCC TGGGCCGTGT CGCGCAGCAT CGCCGGTCAG CTGGGCGCGG AGCCGCAGGC CCTGGCCGAG GTCGCGGGCC TGGTGGCGTC CGGCGACCTG GGCTCCGTTC CCGGTGCGTC GGCGGCGCGC GCGGGCAGCG TGCTGGCCTC CCTGGGCAGC ATGCAGCAGA ACCTGTCGTC GGTGGTCGCC AGGGTGCGCG GTGCATCGGA GGCCATGGCG GAGGGCGCGC TGCAGATCGC GCAGGGCAAT GCAGGCCTGC TGCAGCGTAC CGAGGCGCAG GCGCGGCACC TGGAGCACAC GACGGCATCG ATGGAGCGCA TGACCCAGTC CGTCAACGGC AACGCCGAAT CCGCCCGGCA GGCGGCGCAG CTGGCGGCAT CGGCCAGCGC CGCGGCAGGC AAGGGCGGCG TGGTCGTGGG CGAGGTGGTG GCCACCATGA CCTCGATCGC CGAGAGCTCC GGCAAGATCG CGGACATCAT CGGCGTGATC GACGGCATCG CATTCCAGAC CAACATCCTC GCGCTCAATG CGGCCGTCGA AGCGGCGCGT GCGGGCGAGC AGGGCCGCGG GTTCGCGGTG GTCGCCAGCG AGGTCCGCAG CCTCGCCCAG CGCAGCGCCC AGGCCGCCCG GCAGGTCAAG GCACTCATCG AGGACAGCGT GGCGCGCGTG GACGACGGCT CCCGCCTGGT GGGCCAGGCG GGCTCCACCA TGGCCGACAT CGTGGGACAG GTGGAGCGCG TCGCCCAGCT CATCGCCGAA ATCAACGCTT CCACGGCGGA ACAGACCGGT GGCATCGCTT CGGTGGGCGA AGCGGTCGCG CAACTGGACG AATCGACGCG CCAGAATGCC GCCATGGTGG AGCAGGGGGC CGCGGCCTCC CGCACCCTGG AGCAGCAGGC CACTCAGCTG GCGCAGGCCG TGGGCGTCTT CAAGCTGGCT GCCTGA
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Protein sequence | MGFSRMTVAR RLAVAFGIVV GLLVVVAGIA LVKVQAIDRA LAANGSEHVP VQRYAINFRG SAHDRSIAVR DVVLAATPQQ REREIAVIAS LAAFYAQSAG PLESILGRPG AEPQLGALYA DIRRAEAQAV ASTQRIVALA GQDDAQAREV LWKQAKPQYV QWLAAINRLI DFEEARIQAE NATAMAQASG FRAVMMGALV LALAASVLVA WAVSRSIAGQ LGAEPQALAE VAGLVASGDL GSVPGASAAR AGSVLASLGS MQQNLSSVVA RVRGASEAMA EGALQIAQGN AGLLQRTEAQ ARHLEHTTAS MERMTQSVNG NAESARQAAQ LAASASAAAG KGGVVVGEVV ATMTSIAESS GKIADIIGVI DGIAFQTNIL ALNAAVEAAR AGEQGRGFAV VASEVRSLAQ RSAQAARQVK ALIEDSVARV DDGSRLVGQA GSTMADIVGQ VERVAQLIAE INASTAEQTG GIASVGEAVA QLDESTRQNA AMVEQGAAAS RTLEQQATQL AQAVGVFKLA A
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