| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2292 |
|---|
| Symbol | |
|---|
| ID | 4668276 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 2522197 |
|---|
| End bp | 2523165 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639823497 |
|---|
| Product | esterase/lipase/thioesterase family protein |
|---|
| Protein accession | YP_970644 |
|---|
| Protein GI | 120610966 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0657] Esterase/lipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00106322 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGCCTCCTA TATTTCCGCC CCCTACGTCC TTCTGGAAAC GCGCCGCCCG CCTTGCCGGC
CTCCTGGCCC TGGCCGCCGG GCTGAGCGCC TGCTCCGGTG TCGGTACCCT GAATGCACTC
GCGCAGCGCA GCGCCGCCGC GGTGGACACC GGCGTGGCCT ACGGCACCCT GCCCCGCCAG
CGGCTGGATG TGTACCGTCC CTCGGTGGCC GCCCCGGCCG GCGGCTGGCC GGTGGTGGTG
TTCTTCTATG GCGGCACCTG GAACAGCGGG GAACGGGGCG ATTACCTGTT CCTGGGCCAG
GCGCTGGCGT CGCGCGGGGT GCTGGCGCTG GTGGCGGACT ACCGGCTGTA TCCGGAGGTG
CGGTATCCGG ATTTCGTCGC CGACAGCGCG CTGGCGGTGG CCTATGGGCT CGAGCATGCG
GCGCGGCTCG GCGGCAATCC GCGCCGGGTG TTCGCGATGG GGCACAGCGC AGGCGCATAC
AACGCGGCGA TGGTGGCGCT GGATCCGCGC TGGCTGGCGG CCACGGGGCA TGCGCCGCGC
GAGCTGGCGG GCTGGATCGG GCTGGCGGGG CCGTACGACT TCTTTCCCAC GGACAACCCG
GAGGCGCAGC CGGTGTTCTT CCACCCGAAC TACCCCGCAC GCTCCCAACC CATCGAGTTC
GCGCACCCGG CCGTGCCCGC GCAGGTGCCC CGGGCCTTCC TGGGCGCGCC GGAGAAGGAC
CGGCTGGTGA GCCCGCAGCG CAGCACGCTG CAGCTGGCGC AGGCACTGCA GGCGGCCGGC
GTGCCCGTGG TGCTGCAGCT CTATCCGCGC GCCAGCCATA CGACGCTGGT GGGCGCGTTC
GCATGGCCGC TGCGCTGGGT GGCGCCGGTA CTGGACGACG TGGCCGGGTT CATCGCCTCG
GCCCCGCCCG CGGCGCCGGC ACCGAATATG CGGGAAGCCC CGCTTGAAGG CGCTTCGGCG
GGCAGCTAA
|
|---|
| Protein sequence | MPPIFPPPTS FWKRAARLAG LLALAAGLSA CSGVGTLNAL AQRSAAAVDT GVAYGTLPRQ
RLDVYRPSVA APAGGWPVVV FFYGGTWNSG ERGDYLFLGQ ALASRGVLAL VADYRLYPEV
RYPDFVADSA LAVAYGLEHA ARLGGNPRRV FAMGHSAGAY NAAMVALDPR WLAATGHAPR
ELAGWIGLAG PYDFFPTDNP EAQPVFFHPN YPARSQPIEF AHPAVPAQVP RAFLGAPEKD
RLVSPQRSTL QLAQALQAAG VPVVLQLYPR ASHTTLVGAF AWPLRWVAPV LDDVAGFIAS
APPAAPAPNM REAPLEGASA GS
|
|---|
| |