| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2254 |
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| Symbol | |
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| ID | 4665522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 2480023 |
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| End bp | 2481093 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639823459 |
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| Product | sugar ABC transporter, periplasmic sugar-binding protein |
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| Protein accession | YP_970606 |
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| Protein GI | 120610928 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4213] ABC-type xylose transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.243206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000370627 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAGCGAA CCTTTCTGAA AACCACTGCC ACCGCCCTCG CCCTGGCCGC CCTCGGCACC
CTGCCGCTGG CGCATGCCGC GGACAAGGGC AGCATCGGCA TTTCCATGCC CACCAAGTCC
TCGGCCCGCT GGATCGCGGA CGGCGACAAC ATGGCCCGGG TGCTCAAGGA GCGCGGCTAC
AAGACCGACC TGCAGTACGC GGAAGACGAC ATCCCCAACC AGCTCGCCCA GATCGAGAAC
ATGGTGACCA AGGGCGCGAA GGTGCTCGTG ATCGCCTCCA TCGACGGCAC CACGCTCTCG
CGCGTGCTGC AGAGCGCGGC GGACAAGGGC GTGAAGGTCA TCGCCTACGA CCGCCTCATC
AAGGGTTCGA AGAACGTCGA TTACTACGCC ACCTTCGACA ACTTCCAGGT CGGGGTGCTG
CAGGCGCAGT CCATCGTGGA CAAGCTGGGC CTCAAGCAGG GCAAGGGCCC GTTCAACATC
GAACTCTTCG GCGGCTCGCC CGACGACAAC AACGCCTTCT TCTTCTACGA CGGCGCGATG
AGCGTGCTGC AGCCCTACAT CGACAGCGGC AAGCTGGTGG TGCGCAGCAA GCAGACCGGG
ATGAACAAGG TCGGCACCCT GCGCTGGGAC GGCGCGACCG CCCAGGCCCG CATGGACAAC
CTGCTCTCGG CCTACTACGG CAAGGAGAAG GTGGACGCGG TGCTTTCGCC GTACGACGGG
ATCTCCATCG GCATCCTTTC GTCGCTCAAG GGCGTGGGCT ACTGCACCGC CCAGCAGCCC
TGCCCGATCG TGACCGGCCA GGACGCCGAG GTGCCTTCGG TCAAGTCCAT CCTGAAGGGC
GAGCAGACAT CCACCGTGTT CAAGGACACG CGTGAGCTCG CCAAGGTGGC GGCCGACATG
GTGGACGCGG TGCTGTCGGG CAAGCAGCCC GAGATCAACG ACACCAAGAC CTACAACAAC
GGCGTGAAGG TCGTGCCCTC CCACCTGCTC AAGCCGGTGC TGGTGGACCA GTCGAACTGG
AAGAAGGTGC TGGTGGACAG CGGCTACTAC AAGGAATCGC AGATCAAGTG A
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| Protein sequence | MKRTFLKTTA TALALAALGT LPLAHAADKG SIGISMPTKS SARWIADGDN MARVLKERGY
KTDLQYAEDD IPNQLAQIEN MVTKGAKVLV IASIDGTTLS RVLQSAADKG VKVIAYDRLI
KGSKNVDYYA TFDNFQVGVL QAQSIVDKLG LKQGKGPFNI ELFGGSPDDN NAFFFYDGAM
SVLQPYIDSG KLVVRSKQTG MNKVGTLRWD GATAQARMDN LLSAYYGKEK VDAVLSPYDG
ISIGILSSLK GVGYCTAQQP CPIVTGQDAE VPSVKSILKG EQTSTVFKDT RELAKVAADM
VDAVLSGKQP EINDTKTYNN GVKVVPSHLL KPVLVDQSNW KKVLVDSGYY KESQIK
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