| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2236 |
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| Symbol | |
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| ID | 4666536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 2455875 |
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| End bp | 2458394 |
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| Gene Length | 2520 bp |
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| Protein Length | 839 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639823441 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_970588 |
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| Protein GI | 120610910 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.710267 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000913845 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCATCC CGTTCCTGTC CCGCGCTGTC CGCGCGTTCG CGCAGCGCAT GTCGCCATGG
CCCGCCGGCA CCCCGGTACT TATCGCCGGT CTCGCGGCGG CGGCGGGGGC GGTGGCGAGC
GTGCTCGTGG TGAGCGTCGG CGACCTGCGC AGCGCCATGG CCACCAGCGA AGGCCAGGCC
CGCCTGCTCG CCCGGGTGCT GGAAGACCAG ACCACGCGCA CTTTCGATTC GGCCGAGATG
GTGCTGGCGA CACTGGCGCA CGCGCAGGTC ACCGACACGC ACGGGGGCAG CGACCGCCAT
GCCGGCGCCG GGGAAGCCAT GCGGCAGGCC CTCACCGCCC TGCCCTTCAT CCGCAGCGTG
TCGCTCGTGG ACGAACGCGG GCGGGTGCTG GCGAGCACCG ATGCCGACAT CGCCGGGATG
GAGATCGACC GCAGGCGCCT GGGCCCGTGG CAGGAAGCCG GGGGCGCGTA CATCGGCCCG
CGGCAGCCCG GGCGCGGGCT GGAAAGCCTC CAGCGCGGCG TTCCCCCGCC CCCGGTCCCG
CCGGGGCTGG CCTTCGTTCC CGTACTGCAC GGGTTCCGCG ACCATGCCGG CGCGCCGATG
ATGGTGGTGG CGCTGGTCAA TCCGGACGCG CTGTCCAACT TCCAGTACCT GGCGCTCGAG
TCGCTGAACT ACGACGCGGT GATCGCCACC GACGACGGGC GCCTGCTCGC GTCCTCGGTT
CCCCTTCCCG ATCCGGACAC TCCGGACATC GCCTCGCTGC CGGTGTTCAC GCGCCTGCTG
CCCCTGCAGG AGCACGGCAG CTACGTCGGC CCGGGCGTGC AGGGGCCCGA CCGCATCCTG
GCCTATCGCG CGTCCCGCAG CAAGCCGCTC GTGGTCATCG TGGAGGAGCC CTGGCACGAG
GCCTTCATGC GCTGGCTGCG CGACTCCTGT CCGTTCCTGG CGATGGAACT GGGACTTGTG
GCGCTGGTGC TGGCGCTTAC CTGGATCGCC TGGCGCAGCC TGCGCGCGCG CGCAGCGGCG
CGGGCGGCGG TGGACGCGGC GCAGGAACGC ATCGCGCGCA GCGAGCGGGA CCTCGCACTG
CTGCTGCGCA GCGTGCAGGA ACTGATCTTC CGCACCGACC GCGACGGCGT GTTCACCTAT
GTGAACGCCC GCTGGAACGC ACTCTGGGGG GAGCCGCCGG CTTCGGCGAT CGGGCGCAGG
CTGCAGGACC TGGTCGCTCC CGAAAGCCAG GAGCGGGTGG CCGCGATGCT GGACCCGCGC
TCCCCGTCCG CGCTGCGCAC CCGCCAGTTG CGGGTGCGCT CGCCCCTGGG CGGCGAGCGG
GTGCTCGACG TGGCGGCGGT GCCGCTGCGC GCCGCGGACG GCCACGTGAT CGCCTTCGCG
GGCAGCGCGG TGGACGTGAC GGAGCGCGAG CGGGGCGACC AGCGCCTGCG CGCCCAGGTG
GCTTTCCAGA ACCTGTTGCT GGAGACAAGC CCGCAGCCGA TGATGCTGAC CGACCTCGCC
CACCGCGTGG TGCTCGTGAA CCGGTCCTGG GAGCAGGCGA TGGGCTGCCC GCGGGAGCAC
ATCGTGGGCG AACGCCGGGC CCTCTACCCG GGCGAGGAAG CGGACAACGC CGCGCTTTCT
GCCGGCGGCG GCACCACGCT GGAGCGCGAC CTGCCCTACG GCGACGGCAC GCGGCGCGCC
ACGCGCGTGC TCAAGGCCGC CGTGCACGGG GACCGCGGCG ACGTCACGGG CGTGCTCAGC
ATCCTCGTGG ACATCAGCGA ATTCCGCGAG GCCGAGCGCG CCACCCGCGA GGCGTACGAC
GCCGCCGAGG AAGCGGCCCG CACCCGGACC CAGTTCGTGG CCAACATGAG CCACGAGTTG
CGCACGCCGC TGCAGGCCAT CATCGGCTTC GCGGAGCTGG GCTCGGCACG CAGCCAGGAC
GAACGCCTGG GCGCGATGTT CACCGACATC CTCGCGGCCG GCCAGCGCAT GCTGGCGCTG
GTGAACGACC TGCTCGACGT GGCCAAGATC GAGAGCGACA TCGGCACCAT CCACCTGGAA
CGCACCGACC TGCGCGGCCA CATCCGCACG GTGGCGCGCG AACTCGGCCC CCTGGTCGCG
TCGCGCCGGC AGGATCTGCG CATCGACCTG CCGCAGCATC CCCTGGTGGC ACGGGCGGAT
CCGCGGCGCT TCCAGCAGGT CGTGCGCAAC GTGCTGGCCA ACGCCATCAA GTTCTCTCCC
GACGGCTCGT GCATCCAGCT GCGCGCCGGC ATGGATGCCG AGGACACCAT CTGCATCGAA
GTGCAGGACC AGGGCCCCGG CATACCGCCC GCCGAGCTGG AACGCATCTT CGACGCCTTC
GCCCAGTCGA GCCGCACGCG CAACCGCTCC GGCGGCACGG GCCTGGGCCT GGCCATCTGC
CGCAAGATCG TGGAAGCACT GGAGGGCCGC ATCCACGCGC GCAACGTGGA AGGCGGCGCC
GTCTTCCGCA TCGAGCTTCC TGCCCGCGGG CCGGGAGACA CCGTACCTGC CGCCCTCTGA
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| Protein sequence | MRIPFLSRAV RAFAQRMSPW PAGTPVLIAG LAAAAGAVAS VLVVSVGDLR SAMATSEGQA
RLLARVLEDQ TTRTFDSAEM VLATLAHAQV TDTHGGSDRH AGAGEAMRQA LTALPFIRSV
SLVDERGRVL ASTDADIAGM EIDRRRLGPW QEAGGAYIGP RQPGRGLESL QRGVPPPPVP
PGLAFVPVLH GFRDHAGAPM MVVALVNPDA LSNFQYLALE SLNYDAVIAT DDGRLLASSV
PLPDPDTPDI ASLPVFTRLL PLQEHGSYVG PGVQGPDRIL AYRASRSKPL VVIVEEPWHE
AFMRWLRDSC PFLAMELGLV ALVLALTWIA WRSLRARAAA RAAVDAAQER IARSERDLAL
LLRSVQELIF RTDRDGVFTY VNARWNALWG EPPASAIGRR LQDLVAPESQ ERVAAMLDPR
SPSALRTRQL RVRSPLGGER VLDVAAVPLR AADGHVIAFA GSAVDVTERE RGDQRLRAQV
AFQNLLLETS PQPMMLTDLA HRVVLVNRSW EQAMGCPREH IVGERRALYP GEEADNAALS
AGGGTTLERD LPYGDGTRRA TRVLKAAVHG DRGDVTGVLS ILVDISEFRE AERATREAYD
AAEEAARTRT QFVANMSHEL RTPLQAIIGF AELGSARSQD ERLGAMFTDI LAAGQRMLAL
VNDLLDVAKI ESDIGTIHLE RTDLRGHIRT VARELGPLVA SRRQDLRIDL PQHPLVARAD
PRRFQQVVRN VLANAIKFSP DGSCIQLRAG MDAEDTICIE VQDQGPGIPP AELERIFDAF
AQSSRTRNRS GGTGLGLAIC RKIVEALEGR IHARNVEGGA VFRIELPARG PGDTVPAAL
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