| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2162 |
|---|
| Symbol | |
|---|
| ID | 4669265 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 2376123 |
|---|
| End bp | 2377142 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639823367 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_970514 |
|---|
| Protein GI | 120610836 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0151001 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATCCG CTGCGGGCGA TGCCCTACCG CGTACGGTAT CGCCGCGGAA CCCTGTCACC
GCGCTCCGCG GGCGGCTGCA GCGCTGGTGG CAGGCGCGGC TGCCGCGCAC GGACACCACG
CTGCTCACGC AGCGCAATGT GTACATCCTG CCCACGGGCG CTGGGTGGAT GCTGGCGCTC
ACGCTGCTGG TGCTGCTGGT GGCGTCGATC AATTTCCAGC TCAACCTGGG CTACCTGCTC
ACCTTCCTGC TGGCCGGCAG CGCGGTGGCG GGCATGCACG TGTGCCATGC CACGCTGCGC
GGGCTGACGC TGCACCTGCT GCCGCCGGAG CCGTGCTTCC TGGGGCAGAG CGCGGTGTTC
GAGATCCAGC TGTCGAGCAC GCGCAAGTCG CCGCGCCACG GCATCGCGCT GGCGGTGCAT
GGCGGCGGTG CGCCGCACTG GGCCTGGGCG GACGTGCCAG CGCAGGGCAC GGCTACCGTG
CAGGTGGCCT TCCAGCCGCA GCGCAGGGGC CTGCACGACG TGCCGCTGCT CACGGCCGAG
ACGCGTTTCC CGCTGGGCAC GTTCCGGGTG TGGACGCTTT GGCGACCGGC CGCGCAGGTG
CTGGTCTATC CGCGTCCCGA GCTGCCGCCG CCGCCCCTTC CGGCTGGCGA GCCGAGCGCA
GGCGGCGCCG GCAGCGCGCC GGCGCAGGGC ATCGGCGAGT TCGACGGCGT GCGCGCCTAC
CGGCGCGGGG ATCCGCTCAA GCTCGTGGTC TGGAAGAAGG CCGCGCGGTC GATCGCCACC
GGCACGGACG ACCTCGTGAG CCGCGACGCG CAGCAGACGC GGCGGCAGGA ACTGTGGCTC
GACATGGCGC TCACCAGCCT CAGCGATCCC GAGGCCCGCA TCTCCCGCCT CGCGTCCTGG
GTGCTGCAGG CCGAGCGGCT GGGCCTGGAT TACGGCCTGC GCCTGCCTTC CGGTGAAATC
GTCCAGGGCA GCGGACCGGC GCACGAGCGG CGCTGCCTGG AGGCGCTCGC ACTGTGCTGA
|
|---|
| Protein sequence | MTSAAGDALP RTVSPRNPVT ALRGRLQRWW QARLPRTDTT LLTQRNVYIL PTGAGWMLAL
TLLVLLVASI NFQLNLGYLL TFLLAGSAVA GMHVCHATLR GLTLHLLPPE PCFLGQSAVF
EIQLSSTRKS PRHGIALAVH GGGAPHWAWA DVPAQGTATV QVAFQPQRRG LHDVPLLTAE
TRFPLGTFRV WTLWRPAAQV LVYPRPELPP PPLPAGEPSA GGAGSAPAQG IGEFDGVRAY
RRGDPLKLVV WKKAARSIAT GTDDLVSRDA QQTRRQELWL DMALTSLSDP EARISRLASW
VLQAERLGLD YGLRLPSGEI VQGSGPAHER RCLEALALC
|
|---|
| |