| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2024 |
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| Symbol | |
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| ID | 4667599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 2204920 |
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| End bp | 2206953 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639823235 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_970382 |
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| Protein GI | 120610704 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.136929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTTCA GCCGACACGG TCGTGCGGAA GCCGGCTTTC TTGTTGCGTT CCTTCCTCCA
CGACCCCTTC CAGGATTCCA CGTGCCGTCC AACGATCCCT CCCTGCTGAC CGCCCACGAC
GCCTACCTGC TGCGCGAGGG CACGCATGCG CGCCTCTACC AGTCGCTGGG CTGCCACCTG
CGCCGCGCGG AAGGCGTGCC CGTGCAGGAG GTGCGCGGCG CGGACTTCGC GGTATGGGCC
CCGAACGCGG CCTCGGTCTC GGTGATCGGC GACTGGAACG GCTGGAACCC GGAGGCCGAC
CCGCTGCTCC CCCGCGGCGA CGACAGCGGC GTGTGGGAGG GCTTCGCGCC CGATGCCACC
CACGGGCAGG CTTACAAGTA CCGCATCGTG TCGCGCAATG GCGGCCGGGT GCTGGAAAAG
GCGGACCCGC TGGCCATCTG CTCCGAGCTG CCGCCGCGCA CCGCATCGCG CATCTGGGAC
CTCGACTACA CGTGGAGCGA CGGTGAATGG ATGGCCTCGC GCGGCCCGCG CAATGCGCTG
GGCGCCCCGA TGTCGATCTA CGAGGTGCAT GCCGGCTCCT GGCGCCGCAG GGACGGCCAG
TTCATGGGCT ACCGCGAGCT GGCCCATGCA CTGGGCGAGT ATGTGCAGTC GATGGGCTTC
ACCCACGTGG AGCTGATGCC CATCACCGAG CATCCGTTCT ACGGCTCCTG GGGCTACCAG
ACCACCGGCT ACTTCGCGCC CACGGCGCGC TACGGCACGC CGCAGGATTT CATGTACTTC
GTGGACCACC TGCACCAGCG CGGCATCGGC GTGCTGCTGG ACTGGGTGCC CTCGCACTTC
CCGATGGACG GGCACGGGCT GGCGGAGTTC GACGGCACGC ACCTGTACGA GCACGCCGAC
CCGCGCCAGG GCTTCCATCC GGAGTGGAAC TCGGCCATCT TCAACTATGG CCGCAACGAG
GTGCGCAGCT TCCTCATCTC CTCGGGCCTG TTCTGGATCG ACAAGTATCA CCTGGACGGC
CTGCGCGTGG ACGCGGTGGC GTCCATGCTC TACCTGGACT ACGCACGCAA GCATGGCGAA
TGGGTGCCCA ACCGCCACGG CGGGCGCGAG AATCTGGAGG CGATCGAGTT CATGCGGCTG
CTCAACCGCT CGCTCTACCG CGACCACCCG GACACGGTGA GCATCGCCGA GGAATCCACC
GCCTGGCCCA TGGTGTCGCG CCCCGTGGAA ATGAACGGGC TGGGCTTCGG CATGAAGTGG
AACATGGGCT GGATGCACGA CACGCTGTCG TACTTCAAGG AAGACCCGGT CCACCGCCGC
TACCACCACC ACAAGCTCAC GTTCTCGCTG GTGTATGCCT TCAACGAGAA CTTCGTGCTG
CCGCTCTCGC ACGACGAAGT CGTCTATGGC AAGGGGTCGC TCGTCAACAA GATGCCGGGC
GACGAATGGC AGCAGTTCGC CAACCTGCGC GCGCTGTTCG GCCTGATGTG GGCCCACCCC
GGCAAGAAAC TGCTCTTCAT GGGCGGCGAG TTCGGCCAGC GCCGCGAATG GACGCACGAG
GGCGAGCTCG AATGGTGGGT CTGCGACGGC CCGCTGCACG GCGGCCTGCA GCGCATGGTG
CGCGAGCTCA ACCGCGTGCT GCGCAGCGAG CCGGCCCTGC ACGACATCGA TTTCTCCCCC
GAAGGCTTCC AGTGGGTGGA AGCCGACGAC GCCGACCGCA GCGTGATCGC CTTCCTGCGC
AAACCCGGCG CCGAGGCCCA GCGCCAGGGC GCCACGCCGG TGCTGGTGGT CTGCAACATG
ACGCCGGTGC CGCGAGAGAA CTACCTCGTG GGGGTGCCCT CCGCCGGCTA CTGGCGGGAA
CTGTTCAACA GCGATGCCCG CGAGTTCGGC GGCGCCGGCT GGGGCAACCT GGGCGGAGTG
GAAGCCGCGC CCGTGCGCTC GCACCACTGG GCGCAGTCGC TGTGCCTCAC GCTGCCGCCG
CTGTCCACCC TCATCCTCCG ACTGGAGCCT GCACGCCATG CCTTCCCCGC CTGA
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| Protein sequence | MAFSRHGRAE AGFLVAFLPP RPLPGFHVPS NDPSLLTAHD AYLLREGTHA RLYQSLGCHL
RRAEGVPVQE VRGADFAVWA PNAASVSVIG DWNGWNPEAD PLLPRGDDSG VWEGFAPDAT
HGQAYKYRIV SRNGGRVLEK ADPLAICSEL PPRTASRIWD LDYTWSDGEW MASRGPRNAL
GAPMSIYEVH AGSWRRRDGQ FMGYRELAHA LGEYVQSMGF THVELMPITE HPFYGSWGYQ
TTGYFAPTAR YGTPQDFMYF VDHLHQRGIG VLLDWVPSHF PMDGHGLAEF DGTHLYEHAD
PRQGFHPEWN SAIFNYGRNE VRSFLISSGL FWIDKYHLDG LRVDAVASML YLDYARKHGE
WVPNRHGGRE NLEAIEFMRL LNRSLYRDHP DTVSIAEEST AWPMVSRPVE MNGLGFGMKW
NMGWMHDTLS YFKEDPVHRR YHHHKLTFSL VYAFNENFVL PLSHDEVVYG KGSLVNKMPG
DEWQQFANLR ALFGLMWAHP GKKLLFMGGE FGQRREWTHE GELEWWVCDG PLHGGLQRMV
RELNRVLRSE PALHDIDFSP EGFQWVEADD ADRSVIAFLR KPGAEAQRQG ATPVLVVCNM
TPVPRENYLV GVPSAGYWRE LFNSDAREFG GAGWGNLGGV EAAPVRSHHW AQSLCLTLPP
LSTLILRLEP ARHAFPA
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